Protein–RNA interactions for Protein: Q9WTN3

Srebf1, Sterol regulatory element-binding protein 1, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srebf1Q9WTN3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Srebf1Q9WTN3 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Srebf1Q9WTN3 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Srebf1Q9WTN3 Gm29257-201ENSMUST00000186115 639 ntBASIC19.23■□□□□ 0.67
Srebf1Q9WTN3 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Srebf1Q9WTN3 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Srebf1Q9WTN3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Srebf1Q9WTN3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Srebf1Q9WTN3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Srebf1Q9WTN3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Srebf1Q9WTN3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Srebf1Q9WTN3 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Srebf1Q9WTN3 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Srebf1Q9WTN3 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.22■□□□□ 0.67
Srebf1Q9WTN3 Gm7291-201ENSMUST00000199147 382 ntBASIC19.22■□□□□ 0.67
Srebf1Q9WTN3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Srebf1Q9WTN3 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Srebf1Q9WTN3 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Srebf1Q9WTN3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Srebf1Q9WTN3 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Srebf1Q9WTN3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Srebf1Q9WTN3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Srebf1Q9WTN3 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Srebf1Q9WTN3 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Srebf1Q9WTN3 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.21■□□□□ 0.67
Srebf1Q9WTN3 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Srebf1Q9WTN3 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.21■□□□□ 0.67
Srebf1Q9WTN3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Srebf1Q9WTN3 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Srebf1Q9WTN3 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Srebf1Q9WTN3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Srebf1Q9WTN3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Srebf1Q9WTN3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srebf1Q9WTN3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.2■□□□□ 0.66
Srebf1Q9WTN3 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srebf1Q9WTN3 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srebf1Q9WTN3 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.2■□□□□ 0.66
Srebf1Q9WTN3 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
Srebf1Q9WTN3 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srebf1Q9WTN3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.2■□□□□ 0.66
Srebf1Q9WTN3 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srebf1Q9WTN3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srebf1Q9WTN3 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.2■□□□□ 0.66
Srebf1Q9WTN3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srebf1Q9WTN3 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Srebf1Q9WTN3 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Srebf1Q9WTN3 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Srebf1Q9WTN3 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Srebf1Q9WTN3 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Srebf1Q9WTN3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Srebf1Q9WTN3 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Srebf1Q9WTN3 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Srebf1Q9WTN3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Srebf1Q9WTN3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Srebf1Q9WTN3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Srebf1Q9WTN3 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.18■□□□□ 0.66
Srebf1Q9WTN3 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Srebf1Q9WTN3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.18■□□□□ 0.66
Srebf1Q9WTN3 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Srebf1Q9WTN3 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Srebf1Q9WTN3 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Srebf1Q9WTN3 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Srebf1Q9WTN3 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Srebf1Q9WTN3 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Srebf1Q9WTN3 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Srebf1Q9WTN3 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.17■□□□□ 0.66
Srebf1Q9WTN3 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Srebf1Q9WTN3 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Srebf1Q9WTN3 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Srebf1Q9WTN3 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Srebf1Q9WTN3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Srebf1Q9WTN3 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.17■□□□□ 0.66
Srebf1Q9WTN3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Srebf1Q9WTN3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Srebf1Q9WTN3 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Srebf1Q9WTN3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srebf1Q9WTN3 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Srebf1Q9WTN3 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Srebf1Q9WTN3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srebf1Q9WTN3 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srebf1Q9WTN3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srebf1Q9WTN3 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srebf1Q9WTN3 Gm27405-201ENSMUST00000184201 112 ntBASIC19.16■□□□□ 0.66
Srebf1Q9WTN3 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.16■□□□□ 0.66
Srebf1Q9WTN3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.16■□□□□ 0.66
Srebf1Q9WTN3 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.16■□□□□ 0.66
Srebf1Q9WTN3 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Srebf1Q9WTN3 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srebf1Q9WTN3 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srebf1Q9WTN3 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srebf1Q9WTN3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srebf1Q9WTN3 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.16■□□□□ 0.66
Srebf1Q9WTN3 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srebf1Q9WTN3 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srebf1Q9WTN3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Srebf1Q9WTN3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Srebf1Q9WTN3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Srebf1Q9WTN3 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Srebf1Q9WTN3 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.15■□□□□ 0.66
Srebf1Q9WTN3 Smad6-203ENSMUST00000179458 273 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms