Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tubd1Q9R1K7 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Tubd1Q9R1K7 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tubd1Q9R1K7 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tubd1Q9R1K7 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Tubd1Q9R1K7 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tubd1Q9R1K7 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tubd1Q9R1K7 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Tubd1Q9R1K7 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.39■□□□□ 0.86
Tubd1Q9R1K7 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tubd1Q9R1K7 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Tubd1Q9R1K7 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Tubd1Q9R1K7 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tubd1Q9R1K7 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tubd1Q9R1K7 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tubd1Q9R1K7 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Tubd1Q9R1K7 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tubd1Q9R1K7 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.39■□□□□ 0.85
Tubd1Q9R1K7 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Tubd1Q9R1K7 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tubd1Q9R1K7 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.39■□□□□ 0.85
Tubd1Q9R1K7 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tubd1Q9R1K7 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Tubd1Q9R1K7 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Tubd1Q9R1K7 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Tubd1Q9R1K7 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tubd1Q9R1K7 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tubd1Q9R1K7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tubd1Q9R1K7 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tubd1Q9R1K7 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tubd1Q9R1K7 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tubd1Q9R1K7 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tubd1Q9R1K7 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tubd1Q9R1K7 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tubd1Q9R1K7 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tubd1Q9R1K7 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Tubd1Q9R1K7 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Tubd1Q9R1K7 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tubd1Q9R1K7 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tubd1Q9R1K7 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.38■□□□□ 0.85
Tubd1Q9R1K7 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Tubd1Q9R1K7 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tubd1Q9R1K7 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tubd1Q9R1K7 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tubd1Q9R1K7 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tubd1Q9R1K7 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tubd1Q9R1K7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tubd1Q9R1K7 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Tubd1Q9R1K7 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.37■□□□□ 0.85
Tubd1Q9R1K7 Gm43137-201ENSMUST00000198052 594 ntBASIC20.37■□□□□ 0.85
Tubd1Q9R1K7 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tubd1Q9R1K7 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.37■□□□□ 0.85
Tubd1Q9R1K7 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.37■□□□□ 0.85
Tubd1Q9R1K7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.36■□□□□ 0.85
Tubd1Q9R1K7 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tubd1Q9R1K7 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Tubd1Q9R1K7 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Tubd1Q9R1K7 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tubd1Q9R1K7 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tubd1Q9R1K7 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.35■□□□□ 0.85
Tubd1Q9R1K7 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.35■□□□□ 0.85
Tubd1Q9R1K7 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tubd1Q9R1K7 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tubd1Q9R1K7 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tubd1Q9R1K7 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tubd1Q9R1K7 Spcs1-204ENSMUST00000226782 949 ntBASIC20.34■□□□□ 0.85
Tubd1Q9R1K7 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tubd1Q9R1K7 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
Tubd1Q9R1K7 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tubd1Q9R1K7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tubd1Q9R1K7 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tubd1Q9R1K7 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.34■□□□□ 0.85
Tubd1Q9R1K7 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tubd1Q9R1K7 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.33■□□□□ 0.85
Tubd1Q9R1K7 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tubd1Q9R1K7 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.32■□□□□ 0.84
Tubd1Q9R1K7 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
Tubd1Q9R1K7 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tubd1Q9R1K7 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tubd1Q9R1K7 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tubd1Q9R1K7 Gm12251-201ENSMUST00000117893 792 ntBASIC20.32■□□□□ 0.84
Tubd1Q9R1K7 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.32■□□□□ 0.84
Tubd1Q9R1K7 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tubd1Q9R1K7 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tubd1Q9R1K7 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tubd1Q9R1K7 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
Tubd1Q9R1K7 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tubd1Q9R1K7 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tubd1Q9R1K7 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tubd1Q9R1K7 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tubd1Q9R1K7 Gm12821-201ENSMUST00000120022 600 ntBASIC20.31■□□□□ 0.84
Tubd1Q9R1K7 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tubd1Q9R1K7 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tubd1Q9R1K7 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tubd1Q9R1K7 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tubd1Q9R1K7 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tubd1Q9R1K7 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tubd1Q9R1K7 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.3■□□□□ 0.84
Tubd1Q9R1K7 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tubd1Q9R1K7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms