Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nubp1Q9R060 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nubp1Q9R060 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.33■□□□□ 0.36
Nubp1Q9R060 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.33■□□□□ 0.36
Nubp1Q9R060 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nubp1Q9R060 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nubp1Q9R060 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nubp1Q9R060 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Nubp1Q9R060 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nubp1Q9R060 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nubp1Q9R060 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nubp1Q9R060 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Nubp1Q9R060 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nubp1Q9R060 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nubp1Q9R060 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nubp1Q9R060 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Nubp1Q9R060 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Nubp1Q9R060 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.32■□□□□ 0.36
Nubp1Q9R060 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nubp1Q9R060 Gm12441-201ENSMUST00000121806 588 ntBASIC17.32■□□□□ 0.36
Nubp1Q9R060 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nubp1Q9R060 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nubp1Q9R060 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nubp1Q9R060 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nubp1Q9R060 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.32■□□□□ 0.36
Nubp1Q9R060 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nubp1Q9R060 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.31■□□□□ 0.36
Nubp1Q9R060 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nubp1Q9R060 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nubp1Q9R060 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nubp1Q9R060 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nubp1Q9R060 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nubp1Q9R060 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Nubp1Q9R060 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Nubp1Q9R060 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nubp1Q9R060 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Nubp1Q9R060 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.3■□□□□ 0.36
Nubp1Q9R060 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nubp1Q9R060 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.3■□□□□ 0.36
Nubp1Q9R060 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.3■□□□□ 0.36
Nubp1Q9R060 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nubp1Q9R060 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nubp1Q9R060 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Nubp1Q9R060 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nubp1Q9R060 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
Nubp1Q9R060 Gm20760-201ENSMUST00000179197 648 ntBASIC17.29■□□□□ 0.36
Nubp1Q9R060 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.29■□□□□ 0.36
Nubp1Q9R060 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.29■□□□□ 0.36
Nubp1Q9R060 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.29■□□□□ 0.36
Nubp1Q9R060 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.29■□□□□ 0.36
Nubp1Q9R060 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nubp1Q9R060 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nubp1Q9R060 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Nubp1Q9R060 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nubp1Q9R060 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.28■□□□□ 0.36
Nubp1Q9R060 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nubp1Q9R060 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nubp1Q9R060 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nubp1Q9R060 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.28■□□□□ 0.36
Nubp1Q9R060 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nubp1Q9R060 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nubp1Q9R060 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nubp1Q9R060 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nubp1Q9R060 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Nubp1Q9R060 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nubp1Q9R060 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nubp1Q9R060 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nubp1Q9R060 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nubp1Q9R060 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nubp1Q9R060 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.27■□□□□ 0.36
Nubp1Q9R060 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.27■□□□□ 0.36
Nubp1Q9R060 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Nubp1Q9R060 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nubp1Q9R060 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Nubp1Q9R060 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.27■□□□□ 0.35
Nubp1Q9R060 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.26■□□□□ 0.35
Nubp1Q9R060 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Nubp1Q9R060 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nubp1Q9R060 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Nubp1Q9R060 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nubp1Q9R060 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nubp1Q9R060 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nubp1Q9R060 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nubp1Q9R060 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Nubp1Q9R060 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nubp1Q9R060 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Nubp1Q9R060 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nubp1Q9R060 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nubp1Q9R060 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nubp1Q9R060 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.25■□□□□ 0.35
Nubp1Q9R060 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Nubp1Q9R060 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.25■□□□□ 0.35
Nubp1Q9R060 Gm22240-201ENSMUST00000175225 82 ntBASIC17.25■□□□□ 0.35
Nubp1Q9R060 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nubp1Q9R060 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.25■□□□□ 0.35
Nubp1Q9R060 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.25■□□□□ 0.35
Nubp1Q9R060 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nubp1Q9R060 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nubp1Q9R060 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.24■□□□□ 0.35
Nubp1Q9R060 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms