Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Crlf1Q9JM58 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Crlf1Q9JM58 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Crlf1Q9JM58 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.08■□□□□ 0.16
Crlf1Q9JM58 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Crlf1Q9JM58 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Crlf1Q9JM58 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
Crlf1Q9JM58 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Crlf1Q9JM58 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Crlf1Q9JM58 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Crlf1Q9JM58 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Crlf1Q9JM58 Gm7290-201ENSMUST00000104990 617 ntBASIC16.07■□□□□ 0.16
Crlf1Q9JM58 Gm12918-201ENSMUST00000120234 636 ntBASIC16.07■□□□□ 0.16
Crlf1Q9JM58 Gm15710-201ENSMUST00000121821 636 ntBASIC16.07■□□□□ 0.16
Crlf1Q9JM58 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Crlf1Q9JM58 Gm5075-201ENSMUST00000196916 622 ntBASIC16.07■□□□□ 0.16
Crlf1Q9JM58 Gm20049-201ENSMUST00000219950 730 ntBASIC16.07■□□□□ 0.16
Crlf1Q9JM58 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.07■□□□□ 0.16
Crlf1Q9JM58 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.07■□□□□ 0.16
Crlf1Q9JM58 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.07■□□□□ 0.16
Crlf1Q9JM58 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Crlf1Q9JM58 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Crlf1Q9JM58 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Crlf1Q9JM58 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Crlf1Q9JM58 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Crlf1Q9JM58 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Crlf1Q9JM58 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Crlf1Q9JM58 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Crlf1Q9JM58 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Crlf1Q9JM58 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Crlf1Q9JM58 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Crlf1Q9JM58 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.06■□□□□ 0.16
Crlf1Q9JM58 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.06■□□□□ 0.16
Crlf1Q9JM58 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.06■□□□□ 0.16
Crlf1Q9JM58 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Crlf1Q9JM58 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Crlf1Q9JM58 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Crlf1Q9JM58 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Crlf1Q9JM58 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Crlf1Q9JM58 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.05■□□□□ 0.16
Crlf1Q9JM58 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Crlf1Q9JM58 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Crlf1Q9JM58 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.05■□□□□ 0.16
Crlf1Q9JM58 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Crlf1Q9JM58 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.04■□□□□ 0.16
Crlf1Q9JM58 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Crlf1Q9JM58 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.04■□□□□ 0.16
Crlf1Q9JM58 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Crlf1Q9JM58 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Crlf1Q9JM58 Gm13148-201ENSMUST00000118892 745 ntBASIC16.04■□□□□ 0.16
Crlf1Q9JM58 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Crlf1Q9JM58 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Crlf1Q9JM58 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Crlf1Q9JM58 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Crlf1Q9JM58 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.03■□□□□ 0.16
Crlf1Q9JM58 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.03■□□□□ 0.16
Crlf1Q9JM58 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.03■□□□□ 0.16
Crlf1Q9JM58 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Crlf1Q9JM58 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Crlf1Q9JM58 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Crlf1Q9JM58 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Crlf1Q9JM58 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Crlf1Q9JM58 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Crlf1Q9JM58 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Crlf1Q9JM58 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.02■□□□□ 0.16
Crlf1Q9JM58 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Crlf1Q9JM58 Gm13836-201ENSMUST00000121159 501 ntBASIC16.02■□□□□ 0.16
Crlf1Q9JM58 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.02■□□□□ 0.16
Crlf1Q9JM58 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.02■□□□□ 0.16
Crlf1Q9JM58 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Crlf1Q9JM58 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Crlf1Q9JM58 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Crlf1Q9JM58 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Crlf1Q9JM58 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Crlf1Q9JM58 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.01■□□□□ 0.15
Crlf1Q9JM58 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.01■□□□□ 0.15
Crlf1Q9JM58 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.01■□□□□ 0.15
Crlf1Q9JM58 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.01■□□□□ 0.15
Crlf1Q9JM58 Gm6365-201ENSMUST00000054711 744 ntBASIC16.01■□□□□ 0.15
Crlf1Q9JM58 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Crlf1Q9JM58 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Crlf1Q9JM58 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Crlf1Q9JM58 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC16■□□□□ 0.15
Crlf1Q9JM58 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Crlf1Q9JM58 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Crlf1Q9JM58 Gm13181-201ENSMUST00000120117 1069 ntBASIC16■□□□□ 0.15
Crlf1Q9JM58 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16■□□□□ 0.15
Crlf1Q9JM58 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16■□□□□ 0.15
Crlf1Q9JM58 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Crlf1Q9JM58 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Crlf1Q9JM58 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Crlf1Q9JM58 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Crlf1Q9JM58 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Crlf1Q9JM58 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.99■□□□□ 0.15
Crlf1Q9JM58 Gm37856-201ENSMUST00000191634 999 ntBASIC15.99■□□□□ 0.15
Crlf1Q9JM58 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.99■□□□□ 0.15
Crlf1Q9JM58 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC15.99■□□□□ 0.15
Crlf1Q9JM58 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Crlf1Q9JM58 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Crlf1Q9JM58 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms