Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rfx5Q9JL61 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rfx5Q9JL61 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rfx5Q9JL61 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rfx5Q9JL61 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.18■□□□□ 0.98
Rfx5Q9JL61 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.18■□□□□ 0.98
Rfx5Q9JL61 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rfx5Q9JL61 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.18■□□□□ 0.98
Rfx5Q9JL61 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rfx5Q9JL61 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rfx5Q9JL61 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rfx5Q9JL61 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rfx5Q9JL61 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Rfx5Q9JL61 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rfx5Q9JL61 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rfx5Q9JL61 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rfx5Q9JL61 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rfx5Q9JL61 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Rfx5Q9JL61 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Rfx5Q9JL61 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rfx5Q9JL61 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Rfx5Q9JL61 Gm43173-201ENSMUST00000202246 593 ntBASIC21.16■□□□□ 0.98
Rfx5Q9JL61 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rfx5Q9JL61 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rfx5Q9JL61 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rfx5Q9JL61 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Rfx5Q9JL61 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.15■□□□□ 0.98
Rfx5Q9JL61 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rfx5Q9JL61 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rfx5Q9JL61 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rfx5Q9JL61 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rfx5Q9JL61 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rfx5Q9JL61 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rfx5Q9JL61 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rfx5Q9JL61 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rfx5Q9JL61 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Rfx5Q9JL61 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.14■□□□□ 0.97
Rfx5Q9JL61 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.14■□□□□ 0.97
Rfx5Q9JL61 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.14■□□□□ 0.97
Rfx5Q9JL61 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rfx5Q9JL61 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.14■□□□□ 0.97
Rfx5Q9JL61 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rfx5Q9JL61 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Rfx5Q9JL61 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rfx5Q9JL61 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rfx5Q9JL61 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rfx5Q9JL61 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rfx5Q9JL61 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rfx5Q9JL61 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rfx5Q9JL61 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rfx5Q9JL61 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.13■□□□□ 0.97
Rfx5Q9JL61 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rfx5Q9JL61 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rfx5Q9JL61 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rfx5Q9JL61 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rfx5Q9JL61 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rfx5Q9JL61 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rfx5Q9JL61 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
Rfx5Q9JL61 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rfx5Q9JL61 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rfx5Q9JL61 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Rfx5Q9JL61 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rfx5Q9JL61 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rfx5Q9JL61 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.12■□□□□ 0.97
Rfx5Q9JL61 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rfx5Q9JL61 Gm8493-201ENSMUST00000196881 489 ntBASIC21.12■□□□□ 0.97
Rfx5Q9JL61 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rfx5Q9JL61 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rfx5Q9JL61 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.12■□□□□ 0.97
Rfx5Q9JL61 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rfx5Q9JL61 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Rfx5Q9JL61 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.11■□□□□ 0.97
Rfx5Q9JL61 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rfx5Q9JL61 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
Rfx5Q9JL61 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rfx5Q9JL61 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rfx5Q9JL61 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rfx5Q9JL61 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.11■□□□□ 0.97
Rfx5Q9JL61 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rfx5Q9JL61 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rfx5Q9JL61 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Rfx5Q9JL61 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rfx5Q9JL61 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rfx5Q9JL61 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.1■□□□□ 0.97
Rfx5Q9JL61 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.1■□□□□ 0.97
Rfx5Q9JL61 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.1■□□□□ 0.97
Rfx5Q9JL61 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rfx5Q9JL61 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.1■□□□□ 0.97
Rfx5Q9JL61 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rfx5Q9JL61 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rfx5Q9JL61 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rfx5Q9JL61 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Rfx5Q9JL61 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rfx5Q9JL61 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rfx5Q9JL61 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.09■□□□□ 0.97
Rfx5Q9JL61 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rfx5Q9JL61 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.09■□□□□ 0.97
Rfx5Q9JL61 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rfx5Q9JL61 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rfx5Q9JL61 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms