Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rbfox1Q9JJ43 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rbfox1Q9JJ43 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rbfox1Q9JJ43 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.93■□□□□ 0.3
Rbfox1Q9JJ43 Mir6236-201ENSMUST00000184437 123 ntBASIC16.93■□□□□ 0.3
Rbfox1Q9JJ43 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.93■□□□□ 0.3
Rbfox1Q9JJ43 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16.93■□□□□ 0.3
Rbfox1Q9JJ43 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.93■□□□□ 0.3
Rbfox1Q9JJ43 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rbfox1Q9JJ43 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rbfox1Q9JJ43 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rbfox1Q9JJ43 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.92■□□□□ 0.3
Rbfox1Q9JJ43 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rbfox1Q9JJ43 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rbfox1Q9JJ43 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rbfox1Q9JJ43 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Rbfox1Q9JJ43 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.92■□□□□ 0.3
Rbfox1Q9JJ43 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rbfox1Q9JJ43 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Rbfox1Q9JJ43 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rbfox1Q9JJ43 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rbfox1Q9JJ43 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rbfox1Q9JJ43 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rbfox1Q9JJ43 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rbfox1Q9JJ43 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rbfox1Q9JJ43 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Rbfox1Q9JJ43 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Rbfox1Q9JJ43 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rbfox1Q9JJ43 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rbfox1Q9JJ43 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rbfox1Q9JJ43 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rbfox1Q9JJ43 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.91■□□□□ 0.3
Rbfox1Q9JJ43 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Rbfox1Q9JJ43 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rbfox1Q9JJ43 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rbfox1Q9JJ43 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Rbfox1Q9JJ43 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rbfox1Q9JJ43 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rbfox1Q9JJ43 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Rbfox1Q9JJ43 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rbfox1Q9JJ43 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rbfox1Q9JJ43 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rbfox1Q9JJ43 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rbfox1Q9JJ43 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rbfox1Q9JJ43 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rbfox1Q9JJ43 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rbfox1Q9JJ43 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rbfox1Q9JJ43 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Rbfox1Q9JJ43 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Rbfox1Q9JJ43 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.89■□□□□ 0.29
Rbfox1Q9JJ43 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rbfox1Q9JJ43 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rbfox1Q9JJ43 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Rbfox1Q9JJ43 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rbfox1Q9JJ43 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rbfox1Q9JJ43 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Rbfox1Q9JJ43 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rbfox1Q9JJ43 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rbfox1Q9JJ43 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rbfox1Q9JJ43 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rbfox1Q9JJ43 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rbfox1Q9JJ43 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rbfox1Q9JJ43 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rbfox1Q9JJ43 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Rbfox1Q9JJ43 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rbfox1Q9JJ43 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Rbfox1Q9JJ43 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rbfox1Q9JJ43 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rbfox1Q9JJ43 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Rbfox1Q9JJ43 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rbfox1Q9JJ43 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rbfox1Q9JJ43 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.88■□□□□ 0.29
Rbfox1Q9JJ43 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rbfox1Q9JJ43 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rbfox1Q9JJ43 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rbfox1Q9JJ43 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rbfox1Q9JJ43 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC16.87■□□□□ 0.29
Rbfox1Q9JJ43 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.87■□□□□ 0.29
Rbfox1Q9JJ43 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.87■□□□□ 0.29
Rbfox1Q9JJ43 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rbfox1Q9JJ43 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rbfox1Q9JJ43 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rbfox1Q9JJ43 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.87■□□□□ 0.29
Rbfox1Q9JJ43 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rbfox1Q9JJ43 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rbfox1Q9JJ43 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rbfox1Q9JJ43 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rbfox1Q9JJ43 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rbfox1Q9JJ43 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rbfox1Q9JJ43 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rbfox1Q9JJ43 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rbfox1Q9JJ43 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rbfox1Q9JJ43 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rbfox1Q9JJ43 Gm43530-201ENSMUST00000195920 274 ntBASIC16.86■□□□□ 0.29
Rbfox1Q9JJ43 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rbfox1Q9JJ43 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Rbfox1Q9JJ43 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.86■□□□□ 0.29
Rbfox1Q9JJ43 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rbfox1Q9JJ43 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rbfox1Q9JJ43 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms