Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tubb3Q9ERD7 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.79■□□□□ 0.76
Tubb3Q9ERD7 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tubb3Q9ERD7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Tubb3Q9ERD7 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tubb3Q9ERD7 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tubb3Q9ERD7 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tubb3Q9ERD7 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Tubb3Q9ERD7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tubb3Q9ERD7 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tubb3Q9ERD7 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tubb3Q9ERD7 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tubb3Q9ERD7 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tubb3Q9ERD7 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Tubb3Q9ERD7 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.77■□□□□ 0.76
Tubb3Q9ERD7 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.77■□□□□ 0.76
Tubb3Q9ERD7 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.77■□□□□ 0.76
Tubb3Q9ERD7 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tubb3Q9ERD7 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Tubb3Q9ERD7 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Tubb3Q9ERD7 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tubb3Q9ERD7 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.77■□□□□ 0.76
Tubb3Q9ERD7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tubb3Q9ERD7 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tubb3Q9ERD7 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.77■□□□□ 0.76
Tubb3Q9ERD7 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Tubb3Q9ERD7 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Tubb3Q9ERD7 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tubb3Q9ERD7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tubb3Q9ERD7 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tubb3Q9ERD7 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tubb3Q9ERD7 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.76■□□□□ 0.75
Tubb3Q9ERD7 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.76■□□□□ 0.75
Tubb3Q9ERD7 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tubb3Q9ERD7 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tubb3Q9ERD7 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tubb3Q9ERD7 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tubb3Q9ERD7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tubb3Q9ERD7 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tubb3Q9ERD7 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tubb3Q9ERD7 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.75■□□□□ 0.75
Tubb3Q9ERD7 Golgb1-201ENSMUST00000023534 498 ntBASIC19.75■□□□□ 0.75
Tubb3Q9ERD7 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.75■□□□□ 0.75
Tubb3Q9ERD7 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tubb3Q9ERD7 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Tubb3Q9ERD7 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tubb3Q9ERD7 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tubb3Q9ERD7 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.74■□□□□ 0.75
Tubb3Q9ERD7 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tubb3Q9ERD7 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Tubb3Q9ERD7 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tubb3Q9ERD7 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.74■□□□□ 0.75
Tubb3Q9ERD7 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tubb3Q9ERD7 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.74■□□□□ 0.75
Tubb3Q9ERD7 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.74■□□□□ 0.75
Tubb3Q9ERD7 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tubb3Q9ERD7 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.74■□□□□ 0.75
Tubb3Q9ERD7 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tubb3Q9ERD7 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tubb3Q9ERD7 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tubb3Q9ERD7 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tubb3Q9ERD7 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tubb3Q9ERD7 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Tubb3Q9ERD7 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tubb3Q9ERD7 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.73■□□□□ 0.75
Tubb3Q9ERD7 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Tubb3Q9ERD7 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.73■□□□□ 0.75
Tubb3Q9ERD7 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tubb3Q9ERD7 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Tubb3Q9ERD7 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.72■□□□□ 0.75
Tubb3Q9ERD7 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tubb3Q9ERD7 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tubb3Q9ERD7 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.72■□□□□ 0.75
Tubb3Q9ERD7 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tubb3Q9ERD7 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tubb3Q9ERD7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Tubb3Q9ERD7 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tubb3Q9ERD7 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Tubb3Q9ERD7 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tubb3Q9ERD7 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tubb3Q9ERD7 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Tubb3Q9ERD7 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tubb3Q9ERD7 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Tubb3Q9ERD7 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tubb3Q9ERD7 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Tubb3Q9ERD7 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Tubb3Q9ERD7 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tubb3Q9ERD7 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Tubb3Q9ERD7 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Tubb3Q9ERD7 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tubb3Q9ERD7 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tubb3Q9ERD7 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tubb3Q9ERD7 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
Tubb3Q9ERD7 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tubb3Q9ERD7 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tubb3Q9ERD7 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tubb3Q9ERD7 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.69■□□□□ 0.74
Tubb3Q9ERD7 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Tubb3Q9ERD7 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tubb3Q9ERD7 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms