Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.64■□□□□ 0.57
Rtp4Q9ER80 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Rtp4Q9ER80 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Rtp4Q9ER80 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.63■□□□□ 0.57
Rtp4Q9ER80 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtp4Q9ER80 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtp4Q9ER80 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtp4Q9ER80 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtp4Q9ER80 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtp4Q9ER80 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtp4Q9ER80 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Rtp4Q9ER80 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.63■□□□□ 0.57
Rtp4Q9ER80 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
Rtp4Q9ER80 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rtp4Q9ER80 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtp4Q9ER80 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.63■□□□□ 0.57
Rtp4Q9ER80 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rtp4Q9ER80 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Rtp4Q9ER80 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtp4Q9ER80 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtp4Q9ER80 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtp4Q9ER80 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Rtp4Q9ER80 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtp4Q9ER80 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rtp4Q9ER80 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rtp4Q9ER80 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rtp4Q9ER80 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rtp4Q9ER80 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.62■□□□□ 0.57
Rtp4Q9ER80 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtp4Q9ER80 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtp4Q9ER80 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtp4Q9ER80 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rtp4Q9ER80 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rtp4Q9ER80 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Rtp4Q9ER80 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rtp4Q9ER80 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Rtp4Q9ER80 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Rtp4Q9ER80 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.61■□□□□ 0.57
Rtp4Q9ER80 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rtp4Q9ER80 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Rtp4Q9ER80 Gm6139-201ENSMUST00000079261 882 ntBASIC18.61■□□□□ 0.57
Rtp4Q9ER80 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rtp4Q9ER80 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Rtp4Q9ER80 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtp4Q9ER80 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Rtp4Q9ER80 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rtp4Q9ER80 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rtp4Q9ER80 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtp4Q9ER80 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Rtp4Q9ER80 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtp4Q9ER80 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtp4Q9ER80 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtp4Q9ER80 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtp4Q9ER80 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtp4Q9ER80 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtp4Q9ER80 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtp4Q9ER80 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtp4Q9ER80 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Rtp4Q9ER80 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtp4Q9ER80 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtp4Q9ER80 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.59■□□□□ 0.57
Rtp4Q9ER80 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rtp4Q9ER80 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtp4Q9ER80 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rtp4Q9ER80 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Rtp4Q9ER80 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Rtp4Q9ER80 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtp4Q9ER80 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtp4Q9ER80 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtp4Q9ER80 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rtp4Q9ER80 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rtp4Q9ER80 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Rtp4Q9ER80 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rtp4Q9ER80 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rtp4Q9ER80 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.58■□□□□ 0.56
Rtp4Q9ER80 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rtp4Q9ER80 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rtp4Q9ER80 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rtp4Q9ER80 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rtp4Q9ER80 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtp4Q9ER80 Mir7075-201ENSMUST00000184187 82 ntBASIC18.57■□□□□ 0.56
Rtp4Q9ER80 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rtp4Q9ER80 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rtp4Q9ER80 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtp4Q9ER80 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtp4Q9ER80 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtp4Q9ER80 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rtp4Q9ER80 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rtp4Q9ER80 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Rtp4Q9ER80 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Rtp4Q9ER80 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rtp4Q9ER80 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rtp4Q9ER80 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rtp4Q9ER80 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.56■□□□□ 0.56
Rtp4Q9ER80 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Rtp4Q9ER80 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rtp4Q9ER80 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rtp4Q9ER80 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Rtp4Q9ER80 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rtp4Q9ER80 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms