Protein–RNA interactions for Protein: Q9EQ46

Vmn1r40, Vomeronasal type-1 receptor 40, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r40Q9EQ46 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vmn1r40Q9EQ46 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vmn1r40Q9EQ46 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Vmn1r40Q9EQ46 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Vmn1r40Q9EQ46 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.88■□□□□ 0.61
Vmn1r40Q9EQ46 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.88■□□□□ 0.61
Vmn1r40Q9EQ46 Gm10493-201ENSMUST00000097270 612 ntBASIC18.88■□□□□ 0.61
Vmn1r40Q9EQ46 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Vmn1r40Q9EQ46 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vmn1r40Q9EQ46 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vmn1r40Q9EQ46 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vmn1r40Q9EQ46 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Vmn1r40Q9EQ46 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vmn1r40Q9EQ46 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vmn1r40Q9EQ46 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vmn1r40Q9EQ46 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.87■□□□□ 0.61
Vmn1r40Q9EQ46 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Vmn1r40Q9EQ46 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vmn1r40Q9EQ46 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vmn1r40Q9EQ46 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vmn1r40Q9EQ46 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vmn1r40Q9EQ46 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vmn1r40Q9EQ46 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vmn1r40Q9EQ46 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Vmn1r40Q9EQ46 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vmn1r40Q9EQ46 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Vmn1r40Q9EQ46 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.86■□□□□ 0.61
Vmn1r40Q9EQ46 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Vmn1r40Q9EQ46 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vmn1r40Q9EQ46 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vmn1r40Q9EQ46 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vmn1r40Q9EQ46 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vmn1r40Q9EQ46 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vmn1r40Q9EQ46 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.85■□□□□ 0.61
Vmn1r40Q9EQ46 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vmn1r40Q9EQ46 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vmn1r40Q9EQ46 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.85■□□□□ 0.61
Vmn1r40Q9EQ46 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Vmn1r40Q9EQ46 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vmn1r40Q9EQ46 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vmn1r40Q9EQ46 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vmn1r40Q9EQ46 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vmn1r40Q9EQ46 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Vmn1r40Q9EQ46 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vmn1r40Q9EQ46 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Vmn1r40Q9EQ46 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vmn1r40Q9EQ46 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vmn1r40Q9EQ46 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vmn1r40Q9EQ46 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Vmn1r40Q9EQ46 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vmn1r40Q9EQ46 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vmn1r40Q9EQ46 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vmn1r40Q9EQ46 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vmn1r40Q9EQ46 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Vmn1r40Q9EQ46 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.83■□□□□ 0.61
Vmn1r40Q9EQ46 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Vmn1r40Q9EQ46 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.83■□□□□ 0.6
Vmn1r40Q9EQ46 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vmn1r40Q9EQ46 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vmn1r40Q9EQ46 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vmn1r40Q9EQ46 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vmn1r40Q9EQ46 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vmn1r40Q9EQ46 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.83■□□□□ 0.6
Vmn1r40Q9EQ46 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Vmn1r40Q9EQ46 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vmn1r40Q9EQ46 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Vmn1r40Q9EQ46 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vmn1r40Q9EQ46 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vmn1r40Q9EQ46 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Vmn1r40Q9EQ46 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.82■□□□□ 0.6
Vmn1r40Q9EQ46 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.82■□□□□ 0.6
Vmn1r40Q9EQ46 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Vmn1r40Q9EQ46 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vmn1r40Q9EQ46 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vmn1r40Q9EQ46 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Vmn1r40Q9EQ46 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.81■□□□□ 0.6
Vmn1r40Q9EQ46 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vmn1r40Q9EQ46 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vmn1r40Q9EQ46 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vmn1r40Q9EQ46 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Vmn1r40Q9EQ46 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vmn1r40Q9EQ46 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.81■□□□□ 0.6
Vmn1r40Q9EQ46 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vmn1r40Q9EQ46 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vmn1r40Q9EQ46 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vmn1r40Q9EQ46 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vmn1r40Q9EQ46 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.81■□□□□ 0.6
Vmn1r40Q9EQ46 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vmn1r40Q9EQ46 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vmn1r40Q9EQ46 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vmn1r40Q9EQ46 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vmn1r40Q9EQ46 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Vmn1r40Q9EQ46 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Vmn1r40Q9EQ46 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vmn1r40Q9EQ46 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vmn1r40Q9EQ46 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vmn1r40Q9EQ46 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vmn1r40Q9EQ46 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vmn1r40Q9EQ46 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.79■□□□□ 0.6
Vmn1r40Q9EQ46 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms