Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cpne8Q9DC53 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.88■□□□□ 0.93
Cpne8Q9DC53 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Cpne8Q9DC53 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cpne8Q9DC53 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cpne8Q9DC53 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cpne8Q9DC53 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Cpne8Q9DC53 Gm14117-201ENSMUST00000122417 843 ntBASIC20.87■□□□□ 0.93
Cpne8Q9DC53 Gm22238-201ENSMUST00000175222 88 ntBASIC20.87■□□□□ 0.93
Cpne8Q9DC53 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Cpne8Q9DC53 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cpne8Q9DC53 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.86■□□□□ 0.93
Cpne8Q9DC53 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpne8Q9DC53 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Cpne8Q9DC53 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpne8Q9DC53 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cpne8Q9DC53 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpne8Q9DC53 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpne8Q9DC53 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cpne8Q9DC53 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpne8Q9DC53 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cpne8Q9DC53 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Cpne8Q9DC53 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpne8Q9DC53 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.85■□□□□ 0.93
Cpne8Q9DC53 Gm43530-201ENSMUST00000195920 274 ntBASIC20.85■□□□□ 0.93
Cpne8Q9DC53 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.85■□□□□ 0.93
Cpne8Q9DC53 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpne8Q9DC53 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cpne8Q9DC53 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpne8Q9DC53 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
Cpne8Q9DC53 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cpne8Q9DC53 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
Cpne8Q9DC53 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Cpne8Q9DC53 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Cpne8Q9DC53 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.84■□□□□ 0.93
Cpne8Q9DC53 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cpne8Q9DC53 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Cpne8Q9DC53 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cpne8Q9DC53 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cpne8Q9DC53 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.83■□□□□ 0.93
Cpne8Q9DC53 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cpne8Q9DC53 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.82■□□□□ 0.92
Cpne8Q9DC53 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cpne8Q9DC53 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cpne8Q9DC53 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Cpne8Q9DC53 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Cpne8Q9DC53 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Cpne8Q9DC53 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cpne8Q9DC53 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Cpne8Q9DC53 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cpne8Q9DC53 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Cpne8Q9DC53 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.81■□□□□ 0.92
Cpne8Q9DC53 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.81■□□□□ 0.92
Cpne8Q9DC53 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.81■□□□□ 0.92
Cpne8Q9DC53 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Cpne8Q9DC53 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Cpne8Q9DC53 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cpne8Q9DC53 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cpne8Q9DC53 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cpne8Q9DC53 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Cpne8Q9DC53 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Cpne8Q9DC53 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cpne8Q9DC53 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cpne8Q9DC53 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cpne8Q9DC53 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cpne8Q9DC53 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cpne8Q9DC53 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cpne8Q9DC53 Gm45102-201ENSMUST00000207427 857 ntBASIC20.79■□□□□ 0.92
Cpne8Q9DC53 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cpne8Q9DC53 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cpne8Q9DC53 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cpne8Q9DC53 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
Cpne8Q9DC53 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cpne8Q9DC53 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cpne8Q9DC53 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cpne8Q9DC53 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cpne8Q9DC53 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.78■□□□□ 0.92
Cpne8Q9DC53 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.78■□□□□ 0.92
Cpne8Q9DC53 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cpne8Q9DC53 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.78■□□□□ 0.92
Cpne8Q9DC53 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cpne8Q9DC53 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.77■□□□□ 0.92
Cpne8Q9DC53 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.77■□□□□ 0.92
Cpne8Q9DC53 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cpne8Q9DC53 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cpne8Q9DC53 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Cpne8Q9DC53 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cpne8Q9DC53 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cpne8Q9DC53 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cpne8Q9DC53 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.77■□□□□ 0.92
Cpne8Q9DC53 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cpne8Q9DC53 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cpne8Q9DC53 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cpne8Q9DC53 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cpne8Q9DC53 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cpne8Q9DC53 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.76■□□□□ 0.91
Cpne8Q9DC53 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cpne8Q9DC53 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Cpne8Q9DC53 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Cpne8Q9DC53 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 147.9 ms