Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Cdc40Q9DC48 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.42■□□□□ 0.54
Cdc40Q9DC48 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cdc40Q9DC48 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdc40Q9DC48 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cdc40Q9DC48 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdc40Q9DC48 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Cdc40Q9DC48 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.41■□□□□ 0.54
Cdc40Q9DC48 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cdc40Q9DC48 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Cdc40Q9DC48 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdc40Q9DC48 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cdc40Q9DC48 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.41■□□□□ 0.54
Cdc40Q9DC48 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Cdc40Q9DC48 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Cdc40Q9DC48 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cdc40Q9DC48 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.4■□□□□ 0.54
Cdc40Q9DC48 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdc40Q9DC48 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdc40Q9DC48 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cdc40Q9DC48 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdc40Q9DC48 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.4■□□□□ 0.54
Cdc40Q9DC48 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cdc40Q9DC48 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdc40Q9DC48 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cdc40Q9DC48 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdc40Q9DC48 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdc40Q9DC48 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdc40Q9DC48 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdc40Q9DC48 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Cdc40Q9DC48 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cdc40Q9DC48 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.39■□□□□ 0.53
Cdc40Q9DC48 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdc40Q9DC48 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdc40Q9DC48 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.38■□□□□ 0.53
Cdc40Q9DC48 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdc40Q9DC48 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdc40Q9DC48 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdc40Q9DC48 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cdc40Q9DC48 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdc40Q9DC48 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cdc40Q9DC48 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.38■□□□□ 0.53
Cdc40Q9DC48 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cdc40Q9DC48 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdc40Q9DC48 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cdc40Q9DC48 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdc40Q9DC48 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdc40Q9DC48 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cdc40Q9DC48 Mir7075-201ENSMUST00000184187 82 ntBASIC18.37■□□□□ 0.53
Cdc40Q9DC48 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.37■□□□□ 0.53
Cdc40Q9DC48 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.37■□□□□ 0.53
Cdc40Q9DC48 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdc40Q9DC48 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdc40Q9DC48 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdc40Q9DC48 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdc40Q9DC48 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdc40Q9DC48 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdc40Q9DC48 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.36■□□□□ 0.53
Cdc40Q9DC48 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Cdc40Q9DC48 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdc40Q9DC48 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdc40Q9DC48 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cdc40Q9DC48 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.36■□□□□ 0.53
Cdc40Q9DC48 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdc40Q9DC48 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdc40Q9DC48 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cdc40Q9DC48 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdc40Q9DC48 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Cdc40Q9DC48 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdc40Q9DC48 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdc40Q9DC48 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdc40Q9DC48 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdc40Q9DC48 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdc40Q9DC48 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.35■□□□□ 0.53
Cdc40Q9DC48 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdc40Q9DC48 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.35■□□□□ 0.53
Cdc40Q9DC48 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdc40Q9DC48 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cdc40Q9DC48 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdc40Q9DC48 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdc40Q9DC48 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdc40Q9DC48 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.34■□□□□ 0.53
Cdc40Q9DC48 Gm6139-201ENSMUST00000079261 882 ntBASIC18.34■□□□□ 0.53
Cdc40Q9DC48 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cdc40Q9DC48 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cdc40Q9DC48 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdc40Q9DC48 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cdc40Q9DC48 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdc40Q9DC48 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Cdc40Q9DC48 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cdc40Q9DC48 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cdc40Q9DC48 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdc40Q9DC48 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.33■□□□□ 0.52
Cdc40Q9DC48 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cdc40Q9DC48 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdc40Q9DC48 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cdc40Q9DC48 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
Cdc40Q9DC48 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cdc40Q9DC48 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.32■□□□□ 0.52
Cdc40Q9DC48 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms