Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gtf3c6Q9D8P7 AC154231.1-201ENSMUST00000220564 2175 ntBASIC21.26■□□□□ 0.99
Gtf3c6Q9D8P7 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gtf3c6Q9D8P7 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gtf3c6Q9D8P7 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gtf3c6Q9D8P7 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gtf3c6Q9D8P7 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gtf3c6Q9D8P7 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gtf3c6Q9D8P7 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC21.26■□□□□ 0.99
Gtf3c6Q9D8P7 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.25■□□□□ 0.99
Gtf3c6Q9D8P7 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gtf3c6Q9D8P7 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.25■□□□□ 0.99
Gtf3c6Q9D8P7 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gtf3c6Q9D8P7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.25■□□□□ 0.99
Gtf3c6Q9D8P7 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gtf3c6Q9D8P7 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gtf3c6Q9D8P7 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gtf3c6Q9D8P7 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.24■□□□□ 0.99
Gtf3c6Q9D8P7 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gtf3c6Q9D8P7 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gtf3c6Q9D8P7 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Gtf3c6Q9D8P7 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gtf3c6Q9D8P7 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gtf3c6Q9D8P7 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gtf3c6Q9D8P7 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gtf3c6Q9D8P7 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Gtf3c6Q9D8P7 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.22■□□□□ 0.99
Gtf3c6Q9D8P7 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Gtf3c6Q9D8P7 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gtf3c6Q9D8P7 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.22■□□□□ 0.99
Gtf3c6Q9D8P7 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gtf3c6Q9D8P7 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Gtf3c6Q9D8P7 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Gtf3c6Q9D8P7 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.21■□□□□ 0.99
Gtf3c6Q9D8P7 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Gtf3c6Q9D8P7 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Gtf3c6Q9D8P7 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gtf3c6Q9D8P7 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.21■□□□□ 0.99
Gtf3c6Q9D8P7 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Gtf3c6Q9D8P7 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Gtf3c6Q9D8P7 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gtf3c6Q9D8P7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Gtf3c6Q9D8P7 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Gtf3c6Q9D8P7 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Gtf3c6Q9D8P7 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gtf3c6Q9D8P7 Gm12922-201ENSMUST00000120626 809 ntBASIC21.2■□□□□ 0.98
Gtf3c6Q9D8P7 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gtf3c6Q9D8P7 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Gtf3c6Q9D8P7 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gtf3c6Q9D8P7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Gtf3c6Q9D8P7 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gtf3c6Q9D8P7 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Gtf3c6Q9D8P7 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Gtf3c6Q9D8P7 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Gtf3c6Q9D8P7 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gtf3c6Q9D8P7 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.19■□□□□ 0.98
Gtf3c6Q9D8P7 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.19■□□□□ 0.98
Gtf3c6Q9D8P7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.19■□□□□ 0.98
Gtf3c6Q9D8P7 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gtf3c6Q9D8P7 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.19■□□□□ 0.98
Gtf3c6Q9D8P7 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Gtf3c6Q9D8P7 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gtf3c6Q9D8P7 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Gtf3c6Q9D8P7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gtf3c6Q9D8P7 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Gtf3c6Q9D8P7 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gtf3c6Q9D8P7 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Gtf3c6Q9D8P7 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Gtf3c6Q9D8P7 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Gtf3c6Q9D8P7 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Gtf3c6Q9D8P7 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.18■□□□□ 0.98
Gtf3c6Q9D8P7 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.18■□□□□ 0.98
Gtf3c6Q9D8P7 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gtf3c6Q9D8P7 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gtf3c6Q9D8P7 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gtf3c6Q9D8P7 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.17■□□□□ 0.98
Gtf3c6Q9D8P7 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.17■□□□□ 0.98
Gtf3c6Q9D8P7 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Gtf3c6Q9D8P7 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Gtf3c6Q9D8P7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.17■□□□□ 0.98
Gtf3c6Q9D8P7 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gtf3c6Q9D8P7 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Gtf3c6Q9D8P7 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gtf3c6Q9D8P7 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Gtf3c6Q9D8P7 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gtf3c6Q9D8P7 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gtf3c6Q9D8P7 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gtf3c6Q9D8P7 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.16■□□□□ 0.98
Gtf3c6Q9D8P7 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gtf3c6Q9D8P7 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Gtf3c6Q9D8P7 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gtf3c6Q9D8P7 Golgb1-201ENSMUST00000023534 498 ntBASIC21.16■□□□□ 0.98
Gtf3c6Q9D8P7 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gtf3c6Q9D8P7 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gtf3c6Q9D8P7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gtf3c6Q9D8P7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Gtf3c6Q9D8P7 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Gtf3c6Q9D8P7 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gtf3c6Q9D8P7 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gtf3c6Q9D8P7 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms