Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf135Q9CWS1 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf135Q9CWS1 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Rnf135Q9CWS1 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf135Q9CWS1 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf135Q9CWS1 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.73■□□□□ 0.91
Rnf135Q9CWS1 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf135Q9CWS1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf135Q9CWS1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf135Q9CWS1 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf135Q9CWS1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.72■□□□□ 0.91
Rnf135Q9CWS1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf135Q9CWS1 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf135Q9CWS1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf135Q9CWS1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf135Q9CWS1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.72■□□□□ 0.91
Rnf135Q9CWS1 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Rnf135Q9CWS1 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf135Q9CWS1 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf135Q9CWS1 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf135Q9CWS1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf135Q9CWS1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf135Q9CWS1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf135Q9CWS1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf135Q9CWS1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf135Q9CWS1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf135Q9CWS1 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf135Q9CWS1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.71■□□□□ 0.91
Rnf135Q9CWS1 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf135Q9CWS1 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.7■□□□□ 0.9
Rnf135Q9CWS1 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf135Q9CWS1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf135Q9CWS1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf135Q9CWS1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf135Q9CWS1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf135Q9CWS1 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf135Q9CWS1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf135Q9CWS1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf135Q9CWS1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf135Q9CWS1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Rnf135Q9CWS1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf135Q9CWS1 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.68■□□□□ 0.9
Rnf135Q9CWS1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf135Q9CWS1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf135Q9CWS1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf135Q9CWS1 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf135Q9CWS1 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.68■□□□□ 0.9
Rnf135Q9CWS1 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf135Q9CWS1 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Rnf135Q9CWS1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf135Q9CWS1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf135Q9CWS1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf135Q9CWS1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Rnf135Q9CWS1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf135Q9CWS1 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf135Q9CWS1 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf135Q9CWS1 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf135Q9CWS1 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Rnf135Q9CWS1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf135Q9CWS1 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.67■□□□□ 0.9
Rnf135Q9CWS1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf135Q9CWS1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf135Q9CWS1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.66■□□□□ 0.9
Rnf135Q9CWS1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf135Q9CWS1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf135Q9CWS1 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf135Q9CWS1 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.66■□□□□ 0.9
Rnf135Q9CWS1 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf135Q9CWS1 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf135Q9CWS1 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf135Q9CWS1 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf135Q9CWS1 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf135Q9CWS1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf135Q9CWS1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
Rnf135Q9CWS1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf135Q9CWS1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.65■□□□□ 0.9
Rnf135Q9CWS1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf135Q9CWS1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf135Q9CWS1 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.9
Rnf135Q9CWS1 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.64■□□□□ 0.9
Rnf135Q9CWS1 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
Rnf135Q9CWS1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Rnf135Q9CWS1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf135Q9CWS1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Rnf135Q9CWS1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.64■□□□□ 0.89
Rnf135Q9CWS1 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.64■□□□□ 0.89
Rnf135Q9CWS1 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf135Q9CWS1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf135Q9CWS1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Rnf135Q9CWS1 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf135Q9CWS1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf135Q9CWS1 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf135Q9CWS1 Gm21956-201ENSMUST00000179946 522 ntBASIC20.63■□□□□ 0.89
Rnf135Q9CWS1 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.63■□□□□ 0.89
Rnf135Q9CWS1 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.63■□□□□ 0.89
Rnf135Q9CWS1 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.63■□□□□ 0.89
Rnf135Q9CWS1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf135Q9CWS1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.63■□□□□ 0.89
Rnf135Q9CWS1 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf135Q9CWS1 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms