Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cldnd1Q9CQX5 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cldnd1Q9CQX5 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.59■□□□□ 0.89
Cldnd1Q9CQX5 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cldnd1Q9CQX5 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Cldnd1Q9CQX5 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cldnd1Q9CQX5 Gm8520-201ENSMUST00000186517 868 ntBASIC20.59■□□□□ 0.89
Cldnd1Q9CQX5 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.59■□□□□ 0.89
Cldnd1Q9CQX5 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cldnd1Q9CQX5 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cldnd1Q9CQX5 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cldnd1Q9CQX5 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cldnd1Q9CQX5 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cldnd1Q9CQX5 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cldnd1Q9CQX5 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cldnd1Q9CQX5 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cldnd1Q9CQX5 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.58■□□□□ 0.89
Cldnd1Q9CQX5 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cldnd1Q9CQX5 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.58■□□□□ 0.89
Cldnd1Q9CQX5 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Cldnd1Q9CQX5 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Cldnd1Q9CQX5 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cldnd1Q9CQX5 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cldnd1Q9CQX5 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.57■□□□□ 0.88
Cldnd1Q9CQX5 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.57■□□□□ 0.88
Cldnd1Q9CQX5 Gm12527-201ENSMUST00000117967 564 ntBASIC20.57■□□□□ 0.88
Cldnd1Q9CQX5 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.57■□□□□ 0.88
Cldnd1Q9CQX5 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cldnd1Q9CQX5 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Cldnd1Q9CQX5 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cldnd1Q9CQX5 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cldnd1Q9CQX5 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cldnd1Q9CQX5 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Cldnd1Q9CQX5 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Cldnd1Q9CQX5 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cldnd1Q9CQX5 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cldnd1Q9CQX5 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cldnd1Q9CQX5 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Cldnd1Q9CQX5 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cldnd1Q9CQX5 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.55■□□□□ 0.88
Cldnd1Q9CQX5 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.55■□□□□ 0.88
Cldnd1Q9CQX5 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cldnd1Q9CQX5 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cldnd1Q9CQX5 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cldnd1Q9CQX5 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cldnd1Q9CQX5 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.54■□□□□ 0.88
Cldnd1Q9CQX5 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cldnd1Q9CQX5 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cldnd1Q9CQX5 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Cldnd1Q9CQX5 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.53■□□□□ 0.88
Cldnd1Q9CQX5 Gm5408-201ENSMUST00000197998 747 ntBASIC20.53■□□□□ 0.88
Cldnd1Q9CQX5 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.53■□□□□ 0.88
Cldnd1Q9CQX5 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cldnd1Q9CQX5 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cldnd1Q9CQX5 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cldnd1Q9CQX5 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cldnd1Q9CQX5 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cldnd1Q9CQX5 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cldnd1Q9CQX5 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cldnd1Q9CQX5 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.52■□□□□ 0.88
Cldnd1Q9CQX5 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.52■□□□□ 0.88
Cldnd1Q9CQX5 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.88
Cldnd1Q9CQX5 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cldnd1Q9CQX5 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Cldnd1Q9CQX5 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cldnd1Q9CQX5 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cldnd1Q9CQX5 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.51■□□□□ 0.87
Cldnd1Q9CQX5 Mir7071-201ENSMUST00000184847 69 ntBASIC20.51■□□□□ 0.87
Cldnd1Q9CQX5 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.51■□□□□ 0.87
Cldnd1Q9CQX5 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cldnd1Q9CQX5 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cldnd1Q9CQX5 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cldnd1Q9CQX5 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cldnd1Q9CQX5 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cldnd1Q9CQX5 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cldnd1Q9CQX5 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cldnd1Q9CQX5 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cldnd1Q9CQX5 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.5■□□□□ 0.87
Cldnd1Q9CQX5 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cldnd1Q9CQX5 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cldnd1Q9CQX5 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cldnd1Q9CQX5 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cldnd1Q9CQX5 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.5■□□□□ 0.87
Cldnd1Q9CQX5 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.49■□□□□ 0.87
Cldnd1Q9CQX5 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cldnd1Q9CQX5 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cldnd1Q9CQX5 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cldnd1Q9CQX5 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cldnd1Q9CQX5 Gm22325-201ENSMUST00000158904 308 ntBASIC20.49■□□□□ 0.87
Cldnd1Q9CQX5 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cldnd1Q9CQX5 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.49■□□□□ 0.87
Cldnd1Q9CQX5 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cldnd1Q9CQX5 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cldnd1Q9CQX5 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Cldnd1Q9CQX5 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cldnd1Q9CQX5 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Cldnd1Q9CQX5 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cldnd1Q9CQX5 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cldnd1Q9CQX5 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.48■□□□□ 0.87
Cldnd1Q9CQX5 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms