Protein–RNA interactions for Protein: Q9CQC3

Protein C9orf135 homolog, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CQC3 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Q9CQC3 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Q9CQC3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.76■□□□□ 0.91
Q9CQC3 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Q9CQC3 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.76■□□□□ 0.91
Q9CQC3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Q9CQC3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Q9CQC3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Q9CQC3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Q9CQC3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Q9CQC3 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.75■□□□□ 0.91
Q9CQC3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Q9CQC3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Q9CQC3 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.75■□□□□ 0.91
Q9CQC3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Q9CQC3 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Q9CQC3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Q9CQC3 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.75■□□□□ 0.91
Q9CQC3 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Q9CQC3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Q9CQC3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Q9CQC3 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Q9CQC3 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Q9CQC3 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Q9CQC3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Q9CQC3 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Q9CQC3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Q9CQC3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Q9CQC3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Q9CQC3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Q9CQC3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.73■□□□□ 0.91
Q9CQC3 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Q9CQC3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Q9CQC3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Q9CQC3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Q9CQC3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Q9CQC3 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Q9CQC3 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Q9CQC3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Q9CQC3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Q9CQC3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Q9CQC3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.72■□□□□ 0.91
Q9CQC3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.72■□□□□ 0.91
Q9CQC3 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.72■□□□□ 0.91
Q9CQC3 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.72■□□□□ 0.91
Q9CQC3 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Q9CQC3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Q9CQC3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.72■□□□□ 0.91
Q9CQC3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Q9CQC3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Q9CQC3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Q9CQC3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Q9CQC3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.71■□□□□ 0.91
Q9CQC3 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.71■□□□□ 0.91
Q9CQC3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
Q9CQC3 Notumos-201ENSMUST00000151998 2659 ntBASIC20.71■□□□□ 0.91
Q9CQC3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.71■□□□□ 0.91
Q9CQC3 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.71■□□□□ 0.91
Q9CQC3 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Q9CQC3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Q9CQC3 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Q9CQC3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Q9CQC3 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Q9CQC3 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Q9CQC3 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Q9CQC3 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q9CQC3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q9CQC3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q9CQC3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.69■□□□□ 0.9
Q9CQC3 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Q9CQC3 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q9CQC3 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q9CQC3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q9CQC3 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.69■□□□□ 0.9
Q9CQC3 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q9CQC3 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Q9CQC3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.68■□□□□ 0.9
Q9CQC3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Q9CQC3 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
Q9CQC3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.68■□□□□ 0.9
Q9CQC3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
Q9CQC3 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Q9CQC3 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Q9CQC3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Q9CQC3 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Q9CQC3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Q9CQC3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Q9CQC3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Q9CQC3 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.68■□□□□ 0.9
Q9CQC3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.68■□□□□ 0.9
Q9CQC3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Q9CQC3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Q9CQC3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Q9CQC3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Q9CQC3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Q9CQC3 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Q9CQC3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Q9CQC3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Q9CQC3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Q9CQC3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms