Protein–RNA interactions for Protein: Q9CPW3

Mrpl54, 39S ribosomal protein L54, mitochondrial, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl54Q9CPW3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mrpl54Q9CPW3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mrpl54Q9CPW3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mrpl54Q9CPW3 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mrpl54Q9CPW3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mrpl54Q9CPW3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mrpl54Q9CPW3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mrpl54Q9CPW3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Mrpl54Q9CPW3 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mrpl54Q9CPW3 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.7■□□□□ 0.42
Mrpl54Q9CPW3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mrpl54Q9CPW3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC17.7■□□□□ 0.42
Mrpl54Q9CPW3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Mrpl54Q9CPW3 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mrpl54Q9CPW3 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mrpl54Q9CPW3 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mrpl54Q9CPW3 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mrpl54Q9CPW3 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mrpl54Q9CPW3 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mrpl54Q9CPW3 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Mrpl54Q9CPW3 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mrpl54Q9CPW3 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.69■□□□□ 0.42
Mrpl54Q9CPW3 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mrpl54Q9CPW3 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.69■□□□□ 0.42
Mrpl54Q9CPW3 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mrpl54Q9CPW3 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mrpl54Q9CPW3 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mrpl54Q9CPW3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mrpl54Q9CPW3 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mrpl54Q9CPW3 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mrpl54Q9CPW3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mrpl54Q9CPW3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mrpl54Q9CPW3 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC17.68■□□□□ 0.42
Mrpl54Q9CPW3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mrpl54Q9CPW3 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Mrpl54Q9CPW3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mrpl54Q9CPW3 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.68■□□□□ 0.42
Mrpl54Q9CPW3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Mrpl54Q9CPW3 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mrpl54Q9CPW3 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Mrpl54Q9CPW3 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mrpl54Q9CPW3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Mrpl54Q9CPW3 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Mrpl54Q9CPW3 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl54Q9CPW3 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl54Q9CPW3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl54Q9CPW3 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl54Q9CPW3 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl54Q9CPW3 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Mrpl54Q9CPW3 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl54Q9CPW3 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl54Q9CPW3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl54Q9CPW3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.67■□□□□ 0.42
Mrpl54Q9CPW3 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl54Q9CPW3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl54Q9CPW3 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl54Q9CPW3 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl54Q9CPW3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl54Q9CPW3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mrpl54Q9CPW3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Mrpl54Q9CPW3 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mrpl54Q9CPW3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mrpl54Q9CPW3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Mrpl54Q9CPW3 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.66■□□□□ 0.42
Mrpl54Q9CPW3 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mrpl54Q9CPW3 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.66■□□□□ 0.42
Mrpl54Q9CPW3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mrpl54Q9CPW3 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.66■□□□□ 0.42
Mrpl54Q9CPW3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mrpl54Q9CPW3 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mrpl54Q9CPW3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mrpl54Q9CPW3 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Mrpl54Q9CPW3 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mrpl54Q9CPW3 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mrpl54Q9CPW3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mrpl54Q9CPW3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Mrpl54Q9CPW3 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mrpl54Q9CPW3 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.65■□□□□ 0.42
Mrpl54Q9CPW3 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Mrpl54Q9CPW3 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Mrpl54Q9CPW3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Mrpl54Q9CPW3 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mrpl54Q9CPW3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mrpl54Q9CPW3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mrpl54Q9CPW3 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mrpl54Q9CPW3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Mrpl54Q9CPW3 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mrpl54Q9CPW3 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Mrpl54Q9CPW3 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mrpl54Q9CPW3 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.65■□□□□ 0.42
Mrpl54Q9CPW3 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mrpl54Q9CPW3 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mrpl54Q9CPW3 Grk6-206ENSMUST00000224995 2971 ntBASIC17.64■□□□□ 0.42
Mrpl54Q9CPW3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Mrpl54Q9CPW3 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Mrpl54Q9CPW3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mrpl54Q9CPW3 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.64■□□□□ 0.41
Mrpl54Q9CPW3 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.64■□□□□ 0.41
Mrpl54Q9CPW3 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Mrpl54Q9CPW3 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms