Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdh23Q99PF4 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Cdh23Q99PF4 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cdh23Q99PF4 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdh23Q99PF4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cdh23Q99PF4 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdh23Q99PF4 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cdh23Q99PF4 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.73■□□□□ 0.91
Cdh23Q99PF4 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.73■□□□□ 0.91
Cdh23Q99PF4 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cdh23Q99PF4 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdh23Q99PF4 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdh23Q99PF4 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdh23Q99PF4 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cdh23Q99PF4 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdh23Q99PF4 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cdh23Q99PF4 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdh23Q99PF4 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdh23Q99PF4 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Cdh23Q99PF4 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cdh23Q99PF4 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdh23Q99PF4 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Cdh23Q99PF4 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cdh23Q99PF4 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdh23Q99PF4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.71■□□□□ 0.91
Cdh23Q99PF4 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Cdh23Q99PF4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdh23Q99PF4 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cdh23Q99PF4 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdh23Q99PF4 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Cdh23Q99PF4 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.7■□□□□ 0.9
Cdh23Q99PF4 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdh23Q99PF4 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdh23Q99PF4 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdh23Q99PF4 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdh23Q99PF4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.69■□□□□ 0.9
Cdh23Q99PF4 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cdh23Q99PF4 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.69■□□□□ 0.9
Cdh23Q99PF4 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.69■□□□□ 0.9
Cdh23Q99PF4 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdh23Q99PF4 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdh23Q99PF4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdh23Q99PF4 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdh23Q99PF4 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cdh23Q99PF4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cdh23Q99PF4 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdh23Q99PF4 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cdh23Q99PF4 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdh23Q99PF4 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdh23Q99PF4 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdh23Q99PF4 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cdh23Q99PF4 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdh23Q99PF4 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdh23Q99PF4 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdh23Q99PF4 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdh23Q99PF4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Cdh23Q99PF4 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdh23Q99PF4 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdh23Q99PF4 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Cdh23Q99PF4 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.66■□□□□ 0.9
Cdh23Q99PF4 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Cdh23Q99PF4 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdh23Q99PF4 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Cdh23Q99PF4 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Cdh23Q99PF4 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.66■□□□□ 0.9
Cdh23Q99PF4 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
Cdh23Q99PF4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cdh23Q99PF4 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cdh23Q99PF4 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdh23Q99PF4 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cdh23Q99PF4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cdh23Q99PF4 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Cdh23Q99PF4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdh23Q99PF4 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.65■□□□□ 0.9
Cdh23Q99PF4 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdh23Q99PF4 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdh23Q99PF4 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.65■□□□□ 0.9
Cdh23Q99PF4 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cdh23Q99PF4 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.65■□□□□ 0.9
Cdh23Q99PF4 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdh23Q99PF4 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdh23Q99PF4 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdh23Q99PF4 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
Cdh23Q99PF4 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cdh23Q99PF4 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cdh23Q99PF4 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdh23Q99PF4 Gm5408-201ENSMUST00000197998 747 ntBASIC20.64■□□□□ 0.89
Cdh23Q99PF4 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.64■□□□□ 0.89
Cdh23Q99PF4 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdh23Q99PF4 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Cdh23Q99PF4 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdh23Q99PF4 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdh23Q99PF4 Gm26524-201ENSMUST00000192339 390 ntBASIC20.63■□□□□ 0.89
Cdh23Q99PF4 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdh23Q99PF4 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
Cdh23Q99PF4 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdh23Q99PF4 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdh23Q99PF4 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdh23Q99PF4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdh23Q99PF4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms