Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.77■□□□□ 0.92
Col25a1Q99MQ5 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Col25a1Q99MQ5 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Col25a1Q99MQ5 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Col25a1Q99MQ5 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Col25a1Q99MQ5 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col25a1Q99MQ5 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Col25a1Q99MQ5 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col25a1Q99MQ5 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Col25a1Q99MQ5 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Col25a1Q99MQ5 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Col25a1Q99MQ5 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col25a1Q99MQ5 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col25a1Q99MQ5 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Col25a1Q99MQ5 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.76■□□□□ 0.91
Col25a1Q99MQ5 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col25a1Q99MQ5 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col25a1Q99MQ5 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col25a1Q99MQ5 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Col25a1Q99MQ5 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col25a1Q99MQ5 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC20.75■□□□□ 0.91
Col25a1Q99MQ5 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Col25a1Q99MQ5 Gm5408-201ENSMUST00000197998 747 ntBASIC20.75■□□□□ 0.91
Col25a1Q99MQ5 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Col25a1Q99MQ5 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.75■□□□□ 0.91
Col25a1Q99MQ5 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.75■□□□□ 0.91
Col25a1Q99MQ5 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Col25a1Q99MQ5 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col25a1Q99MQ5 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col25a1Q99MQ5 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.74■□□□□ 0.91
Col25a1Q99MQ5 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.74■□□□□ 0.91
Col25a1Q99MQ5 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Col25a1Q99MQ5 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col25a1Q99MQ5 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col25a1Q99MQ5 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col25a1Q99MQ5 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Col25a1Q99MQ5 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col25a1Q99MQ5 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col25a1Q99MQ5 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col25a1Q99MQ5 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col25a1Q99MQ5 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col25a1Q99MQ5 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Col25a1Q99MQ5 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Col25a1Q99MQ5 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col25a1Q99MQ5 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.73■□□□□ 0.91
Col25a1Q99MQ5 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Col25a1Q99MQ5 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col25a1Q99MQ5 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col25a1Q99MQ5 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col25a1Q99MQ5 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col25a1Q99MQ5 Gm11643-201ENSMUST00000119578 864 ntBASIC20.72■□□□□ 0.91
Col25a1Q99MQ5 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.72■□□□□ 0.91
Col25a1Q99MQ5 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col25a1Q99MQ5 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col25a1Q99MQ5 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col25a1Q99MQ5 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col25a1Q99MQ5 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col25a1Q99MQ5 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col25a1Q99MQ5 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col25a1Q99MQ5 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Col25a1Q99MQ5 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.71■□□□□ 0.91
Col25a1Q99MQ5 Gm11421-201ENSMUST00000122124 294 ntBASIC20.71■□□□□ 0.91
Col25a1Q99MQ5 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.71■□□□□ 0.91
Col25a1Q99MQ5 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Col25a1Q99MQ5 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.7■□□□□ 0.91
Col25a1Q99MQ5 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.91
Col25a1Q99MQ5 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Col25a1Q99MQ5 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.7■□□□□ 0.9
Col25a1Q99MQ5 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.7■□□□□ 0.9
Col25a1Q99MQ5 Reep4-203ENSMUST00000226563 1444 ntBASIC20.7■□□□□ 0.9
Col25a1Q99MQ5 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Col25a1Q99MQ5 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col25a1Q99MQ5 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.69■□□□□ 0.9
Col25a1Q99MQ5 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Col25a1Q99MQ5 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col25a1Q99MQ5 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.69■□□□□ 0.9
Col25a1Q99MQ5 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
Col25a1Q99MQ5 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Col25a1Q99MQ5 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col25a1Q99MQ5 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Col25a1Q99MQ5 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Col25a1Q99MQ5 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.68■□□□□ 0.9
Col25a1Q99MQ5 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.68■□□□□ 0.9
Col25a1Q99MQ5 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col25a1Q99MQ5 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.68■□□□□ 0.9
Col25a1Q99MQ5 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col25a1Q99MQ5 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col25a1Q99MQ5 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col25a1Q99MQ5 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col25a1Q99MQ5 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.67■□□□□ 0.9
Col25a1Q99MQ5 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col25a1Q99MQ5 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.67■□□□□ 0.9
Col25a1Q99MQ5 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col25a1Q99MQ5 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Col25a1Q99MQ5 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Col25a1Q99MQ5 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.67■□□□□ 0.9
Col25a1Q99MQ5 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col25a1Q99MQ5 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Col25a1Q99MQ5 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col25a1Q99MQ5 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms