Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.93■□□□□ 0.78
Cstf1Q99LC2 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cstf1Q99LC2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cstf1Q99LC2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cstf1Q99LC2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cstf1Q99LC2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Cstf1Q99LC2 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cstf1Q99LC2 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cstf1Q99LC2 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.93■□□□□ 0.78
Cstf1Q99LC2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Cstf1Q99LC2 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cstf1Q99LC2 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cstf1Q99LC2 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cstf1Q99LC2 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cstf1Q99LC2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.92■□□□□ 0.78
Cstf1Q99LC2 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cstf1Q99LC2 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cstf1Q99LC2 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cstf1Q99LC2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cstf1Q99LC2 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.91■□□□□ 0.78
Cstf1Q99LC2 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cstf1Q99LC2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.91■□□□□ 0.78
Cstf1Q99LC2 Gm13234-201ENSMUST00000120010 747 ntBASIC19.91■□□□□ 0.78
Cstf1Q99LC2 Gm12441-201ENSMUST00000121806 588 ntBASIC19.91■□□□□ 0.78
Cstf1Q99LC2 Gm10653-202ENSMUST00000139570 835 ntBASIC19.91■□□□□ 0.78
Cstf1Q99LC2 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cstf1Q99LC2 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cstf1Q99LC2 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Cstf1Q99LC2 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cstf1Q99LC2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cstf1Q99LC2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cstf1Q99LC2 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cstf1Q99LC2 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cstf1Q99LC2 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cstf1Q99LC2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Cstf1Q99LC2 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Cstf1Q99LC2 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cstf1Q99LC2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cstf1Q99LC2 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cstf1Q99LC2 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.9■□□□□ 0.78
Cstf1Q99LC2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cstf1Q99LC2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cstf1Q99LC2 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Cstf1Q99LC2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.89■□□□□ 0.77
Cstf1Q99LC2 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.89■□□□□ 0.77
Cstf1Q99LC2 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cstf1Q99LC2 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cstf1Q99LC2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cstf1Q99LC2 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cstf1Q99LC2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.88■□□□□ 0.77
Cstf1Q99LC2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Cstf1Q99LC2 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Cstf1Q99LC2 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cstf1Q99LC2 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cstf1Q99LC2 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.88■□□□□ 0.77
Cstf1Q99LC2 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cstf1Q99LC2 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cstf1Q99LC2 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cstf1Q99LC2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cstf1Q99LC2 Reep4-203ENSMUST00000226563 1444 ntBASIC19.87■□□□□ 0.77
Cstf1Q99LC2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cstf1Q99LC2 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cstf1Q99LC2 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.87■□□□□ 0.77
Cstf1Q99LC2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cstf1Q99LC2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
Cstf1Q99LC2 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.87■□□□□ 0.77
Cstf1Q99LC2 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Cstf1Q99LC2 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cstf1Q99LC2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cstf1Q99LC2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cstf1Q99LC2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cstf1Q99LC2 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cstf1Q99LC2 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.86■□□□□ 0.77
Cstf1Q99LC2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cstf1Q99LC2 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cstf1Q99LC2 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cstf1Q99LC2 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cstf1Q99LC2 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.86■□□□□ 0.77
Cstf1Q99LC2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cstf1Q99LC2 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Cstf1Q99LC2 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cstf1Q99LC2 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.85■□□□□ 0.77
Cstf1Q99LC2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.85■□□□□ 0.77
Cstf1Q99LC2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cstf1Q99LC2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Cstf1Q99LC2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Cstf1Q99LC2 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cstf1Q99LC2 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Cstf1Q99LC2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cstf1Q99LC2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cstf1Q99LC2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cstf1Q99LC2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cstf1Q99LC2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cstf1Q99LC2 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cstf1Q99LC2 Gm22240-201ENSMUST00000175225 82 ntBASIC19.84■□□□□ 0.77
Cstf1Q99LC2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.84■□□□□ 0.77
Cstf1Q99LC2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cstf1Q99LC2 Gm7514-201ENSMUST00000209475 934 ntBASIC19.84■□□□□ 0.77
Cstf1Q99LC2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.84■□□□□ 0.77
Cstf1Q99LC2 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms