Protein–RNA interactions for Protein: Q91Y15

Pcdha5, Protocadherin alpha 5, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha5Q91Y15 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Pcdha5Q91Y15 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.53■□□□□ 0.88
Pcdha5Q91Y15 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.52■□□□□ 0.88
Pcdha5Q91Y15 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdha5Q91Y15 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdha5Q91Y15 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdha5Q91Y15 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.52■□□□□ 0.88
Pcdha5Q91Y15 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.52■□□□□ 0.88
Pcdha5Q91Y15 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdha5Q91Y15 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.52■□□□□ 0.88
Pcdha5Q91Y15 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdha5Q91Y15 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha5Q91Y15 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha5Q91Y15 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha5Q91Y15 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha5Q91Y15 Gm9959-201ENSMUST00000068277 390 ntBASIC20.51■□□□□ 0.87
Pcdha5Q91Y15 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha5Q91Y15 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha5Q91Y15 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha5Q91Y15 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha5Q91Y15 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha5Q91Y15 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha5Q91Y15 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Pcdha5Q91Y15 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha5Q91Y15 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.5■□□□□ 0.87
Pcdha5Q91Y15 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.5■□□□□ 0.87
Pcdha5Q91Y15 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha5Q91Y15 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
Pcdha5Q91Y15 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha5Q91Y15 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha5Q91Y15 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha5Q91Y15 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha5Q91Y15 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.49■□□□□ 0.87
Pcdha5Q91Y15 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Pcdha5Q91Y15 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha5Q91Y15 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Pcdha5Q91Y15 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha5Q91Y15 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha5Q91Y15 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha5Q91Y15 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha5Q91Y15 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.48■□□□□ 0.87
Pcdha5Q91Y15 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha5Q91Y15 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha5Q91Y15 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha5Q91Y15 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Pcdha5Q91Y15 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdha5Q91Y15 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdha5Q91Y15 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdha5Q91Y15 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Pcdha5Q91Y15 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdha5Q91Y15 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdha5Q91Y15 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdha5Q91Y15 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Pcdha5Q91Y15 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha5Q91Y15 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha5Q91Y15 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Pcdha5Q91Y15 Etf1-202ENSMUST00000180351 108 ntBASIC20.46■□□□□ 0.87
Pcdha5Q91Y15 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha5Q91Y15 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha5Q91Y15 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha5Q91Y15 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Pcdha5Q91Y15 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.45■□□□□ 0.86
Pcdha5Q91Y15 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha5Q91Y15 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.45■□□□□ 0.86
Pcdha5Q91Y15 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha5Q91Y15 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha5Q91Y15 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha5Q91Y15 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.45■□□□□ 0.86
Pcdha5Q91Y15 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.45■□□□□ 0.86
Pcdha5Q91Y15 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha5Q91Y15 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha5Q91Y15 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha5Q91Y15 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha5Q91Y15 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha5Q91Y15 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.44■□□□□ 0.86
Pcdha5Q91Y15 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha5Q91Y15 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha5Q91Y15 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Pcdha5Q91Y15 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdha5Q91Y15 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdha5Q91Y15 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Pcdha5Q91Y15 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdha5Q91Y15 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdha5Q91Y15 Gm14117-201ENSMUST00000122417 843 ntBASIC20.43■□□□□ 0.86
Pcdha5Q91Y15 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.43■□□□□ 0.86
Pcdha5Q91Y15 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdha5Q91Y15 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdha5Q91Y15 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdha5Q91Y15 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdha5Q91Y15 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdha5Q91Y15 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.42■□□□□ 0.86
Pcdha5Q91Y15 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.42■□□□□ 0.86
Pcdha5Q91Y15 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.42■□□□□ 0.86
Pcdha5Q91Y15 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdha5Q91Y15 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdha5Q91Y15 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdha5Q91Y15 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdha5Q91Y15 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdha5Q91Y15 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdha5Q91Y15 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms