Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha8Q91Y12 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Pcdha8Q91Y12 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Pcdha8Q91Y12 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha8Q91Y12 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha8Q91Y12 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha8Q91Y12 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha8Q91Y12 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha8Q91Y12 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha8Q91Y12 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.34■□□□□ 0.69
Pcdha8Q91Y12 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Pcdha8Q91Y12 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha8Q91Y12 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha8Q91Y12 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha8Q91Y12 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha8Q91Y12 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha8Q91Y12 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha8Q91Y12 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha8Q91Y12 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha8Q91Y12 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.34■□□□□ 0.69
Pcdha8Q91Y12 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha8Q91Y12 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha8Q91Y12 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha8Q91Y12 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.34■□□□□ 0.69
Pcdha8Q91Y12 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Pcdha8Q91Y12 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Pcdha8Q91Y12 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdha8Q91Y12 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Pcdha8Q91Y12 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdha8Q91Y12 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdha8Q91Y12 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdha8Q91Y12 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdha8Q91Y12 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.33■□□□□ 0.68
Pcdha8Q91Y12 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdha8Q91Y12 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdha8Q91Y12 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdha8Q91Y12 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdha8Q91Y12 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdha8Q91Y12 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdha8Q91Y12 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdha8Q91Y12 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.33■□□□□ 0.68
Pcdha8Q91Y12 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha8Q91Y12 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Pcdha8Q91Y12 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha8Q91Y12 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha8Q91Y12 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha8Q91Y12 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha8Q91Y12 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha8Q91Y12 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha8Q91Y12 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha8Q91Y12 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdha8Q91Y12 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdha8Q91Y12 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdha8Q91Y12 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdha8Q91Y12 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.31■□□□□ 0.68
Pcdha8Q91Y12 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.31■□□□□ 0.68
Pcdha8Q91Y12 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdha8Q91Y12 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdha8Q91Y12 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdha8Q91Y12 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Pcdha8Q91Y12 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdha8Q91Y12 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.3■□□□□ 0.68
Pcdha8Q91Y12 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Pcdha8Q91Y12 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Pcdha8Q91Y12 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Pcdha8Q91Y12 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha8Q91Y12 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Pcdha8Q91Y12 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Pcdha8Q91Y12 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.29■□□□□ 0.68
Pcdha8Q91Y12 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.29■□□□□ 0.68
Pcdha8Q91Y12 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha8Q91Y12 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha8Q91Y12 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.29■□□□□ 0.68
Pcdha8Q91Y12 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha8Q91Y12 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha8Q91Y12 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.29■□□□□ 0.68
Pcdha8Q91Y12 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha8Q91Y12 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha8Q91Y12 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha8Q91Y12 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha8Q91Y12 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha8Q91Y12 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.28■□□□□ 0.68
Pcdha8Q91Y12 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.28■□□□□ 0.68
Pcdha8Q91Y12 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Pcdha8Q91Y12 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha8Q91Y12 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdha8Q91Y12 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Pcdha8Q91Y12 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdha8Q91Y12 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdha8Q91Y12 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Pcdha8Q91Y12 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.27■□□□□ 0.68
Pcdha8Q91Y12 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.27■□□□□ 0.68
Pcdha8Q91Y12 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdha8Q91Y12 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.27■□□□□ 0.68
Pcdha8Q91Y12 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdha8Q91Y12 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdha8Q91Y12 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdha8Q91Y12 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdha8Q91Y12 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdha8Q91Y12 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms