Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Pcdhb22Q91XZ8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Pcdhb22Q91XZ8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Pcdhb22Q91XZ8 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
Pcdhb22Q91XZ8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Pcdhb22Q91XZ8 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Pcdhb22Q91XZ8 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Pcdhb22Q91XZ8 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Pcdhb22Q91XZ8 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Pcdhb22Q91XZ8 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Pcdhb22Q91XZ8 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC23.33■■□□□ 1.33
Pcdhb22Q91XZ8 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Pcdhb22Q91XZ8 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
Pcdhb22Q91XZ8 Gm27454-201ENSMUST00000185090 204 ntBASIC23.33■■□□□ 1.33
Pcdhb22Q91XZ8 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Pcdhb22Q91XZ8 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Pcdhb22Q91XZ8 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Pcdhb22Q91XZ8 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Pcdhb22Q91XZ8 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdhb22Q91XZ8 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdhb22Q91XZ8 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdhb22Q91XZ8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdhb22Q91XZ8 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdhb22Q91XZ8 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdhb22Q91XZ8 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdhb22Q91XZ8 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdhb22Q91XZ8 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdhb22Q91XZ8 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Pcdhb22Q91XZ8 Gm10209-201ENSMUST00000203397 1607 ntBASIC23.31■■□□□ 1.32
Pcdhb22Q91XZ8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdhb22Q91XZ8 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC23.31■■□□□ 1.32
Pcdhb22Q91XZ8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdhb22Q91XZ8 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdhb22Q91XZ8 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdhb22Q91XZ8 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdhb22Q91XZ8 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdhb22Q91XZ8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdhb22Q91XZ8 Gm15043-201ENSMUST00000118843 1543 ntBASIC23.3■■□□□ 1.32
Pcdhb22Q91XZ8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdhb22Q91XZ8 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdhb22Q91XZ8 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdhb22Q91XZ8 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC23.3■■□□□ 1.32
Pcdhb22Q91XZ8 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdhb22Q91XZ8 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdhb22Q91XZ8 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdhb22Q91XZ8 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdhb22Q91XZ8 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdhb22Q91XZ8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC23.3■■□□□ 1.32
Pcdhb22Q91XZ8 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdhb22Q91XZ8 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdhb22Q91XZ8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdhb22Q91XZ8 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdhb22Q91XZ8 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Pcdhb22Q91XZ8 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Pcdhb22Q91XZ8 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdhb22Q91XZ8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdhb22Q91XZ8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdhb22Q91XZ8 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdhb22Q91XZ8 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC23.29■■□□□ 1.32
Pcdhb22Q91XZ8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdhb22Q91XZ8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhb22Q91XZ8 AC124392.1-201ENSMUST00000225172 5324 ntBASIC23.28■■□□□ 1.32
Pcdhb22Q91XZ8 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhb22Q91XZ8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhb22Q91XZ8 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhb22Q91XZ8 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhb22Q91XZ8 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Pcdhb22Q91XZ8 Gm43909-201ENSMUST00000203443 1876 ntBASIC23.28■■□□□ 1.32
Pcdhb22Q91XZ8 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhb22Q91XZ8 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhb22Q91XZ8 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhb22Q91XZ8 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC23.28■■□□□ 1.32
Pcdhb22Q91XZ8 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Pcdhb22Q91XZ8 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Pcdhb22Q91XZ8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdhb22Q91XZ8 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC23.27■■□□□ 1.32
Pcdhb22Q91XZ8 Spcs1-204ENSMUST00000226782 949 ntBASIC23.27■■□□□ 1.32
Pcdhb22Q91XZ8 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
Pcdhb22Q91XZ8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
Pcdhb22Q91XZ8 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.31
Pcdhb22Q91XZ8 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdhb22Q91XZ8 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdhb22Q91XZ8 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdhb22Q91XZ8 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Pcdhb22Q91XZ8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdhb22Q91XZ8 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdhb22Q91XZ8 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC23.25■■□□□ 1.31
Pcdhb22Q91XZ8 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdhb22Q91XZ8 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC23.25■■□□□ 1.31
Pcdhb22Q91XZ8 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdhb22Q91XZ8 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Pcdhb22Q91XZ8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdhb22Q91XZ8 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC23.25■■□□□ 1.31
Pcdhb22Q91XZ8 Gm7160-202ENSMUST00000188519 1027 ntBASIC23.25■■□□□ 1.31
Pcdhb22Q91XZ8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Pcdhb22Q91XZ8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdhb22Q91XZ8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Pcdhb22Q91XZ8 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdhb22Q91XZ8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC23.24■■□□□ 1.31
Pcdhb22Q91XZ8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC23.24■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms