Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhga11Q91XY8 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.15■□□□□ 0.66
Pcdhga11Q91XY8 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhga11Q91XY8 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.15■□□□□ 0.66
Pcdhga11Q91XY8 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.15■□□□□ 0.66
Pcdhga11Q91XY8 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhga11Q91XY8 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.14■□□□□ 0.66
Pcdhga11Q91XY8 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhga11Q91XY8 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhga11Q91XY8 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhga11Q91XY8 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhga11Q91XY8 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.14■□□□□ 0.65
Pcdhga11Q91XY8 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhga11Q91XY8 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.14■□□□□ 0.65
Pcdhga11Q91XY8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.14■□□□□ 0.65
Pcdhga11Q91XY8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.14■□□□□ 0.65
Pcdhga11Q91XY8 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.14■□□□□ 0.65
Pcdhga11Q91XY8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhga11Q91XY8 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Pcdhga11Q91XY8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhga11Q91XY8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga11Q91XY8 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga11Q91XY8 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga11Q91XY8 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.13■□□□□ 0.65
Pcdhga11Q91XY8 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga11Q91XY8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga11Q91XY8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga11Q91XY8 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.13■□□□□ 0.65
Pcdhga11Q91XY8 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga11Q91XY8 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga11Q91XY8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhga11Q91XY8 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Pcdhga11Q91XY8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhga11Q91XY8 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhga11Q91XY8 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhga11Q91XY8 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhga11Q91XY8 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhga11Q91XY8 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Pcdhga11Q91XY8 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhga11Q91XY8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhga11Q91XY8 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhga11Q91XY8 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.11■□□□□ 0.65
Pcdhga11Q91XY8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhga11Q91XY8 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhga11Q91XY8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Pcdhga11Q91XY8 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhga11Q91XY8 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhga11Q91XY8 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhga11Q91XY8 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhga11Q91XY8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhga11Q91XY8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhga11Q91XY8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhga11Q91XY8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.1■□□□□ 0.65
Pcdhga11Q91XY8 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.1■□□□□ 0.65
Pcdhga11Q91XY8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
Pcdhga11Q91XY8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhga11Q91XY8 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Pcdhga11Q91XY8 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhga11Q91XY8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhga11Q91XY8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhga11Q91XY8 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
Pcdhga11Q91XY8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhga11Q91XY8 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.09■□□□□ 0.65
Pcdhga11Q91XY8 Gm43530-201ENSMUST00000195920 274 ntBASIC19.09■□□□□ 0.65
Pcdhga11Q91XY8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhga11Q91XY8 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.09■□□□□ 0.65
Pcdhga11Q91XY8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhga11Q91XY8 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhga11Q91XY8 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhga11Q91XY8 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.65
Pcdhga11Q91XY8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhga11Q91XY8 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhga11Q91XY8 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhga11Q91XY8 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhga11Q91XY8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhga11Q91XY8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhga11Q91XY8 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhga11Q91XY8 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhga11Q91XY8 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhga11Q91XY8 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhga11Q91XY8 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhga11Q91XY8 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhga11Q91XY8 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhga11Q91XY8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhga11Q91XY8 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Pcdhga11Q91XY8 Mir6236-201ENSMUST00000184437 123 ntBASIC19.07■□□□□ 0.64
Pcdhga11Q91XY8 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.07■□□□□ 0.64
Pcdhga11Q91XY8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhga11Q91XY8 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhga11Q91XY8 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhga11Q91XY8 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhga11Q91XY8 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhga11Q91XY8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Pcdhga11Q91XY8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhga11Q91XY8 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.06■□□□□ 0.64
Pcdhga11Q91XY8 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.06■□□□□ 0.64
Pcdhga11Q91XY8 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Pcdhga11Q91XY8 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhga11Q91XY8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhga11Q91XY8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms