Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgb2Q91XX7 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.69■□□□□ 0.58
Pcdhgb2Q91XX7 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Pcdhgb2Q91XX7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgb2Q91XX7 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Pcdhgb2Q91XX7 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhgb2Q91XX7 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhgb2Q91XX7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhgb2Q91XX7 Gm10399-202ENSMUST00000202768 748 ntBASIC18.68■□□□□ 0.58
Pcdhgb2Q91XX7 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhgb2Q91XX7 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.68■□□□□ 0.58
Pcdhgb2Q91XX7 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhgb2Q91XX7 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhgb2Q91XX7 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhgb2Q91XX7 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.68■□□□□ 0.58
Pcdhgb2Q91XX7 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb2Q91XX7 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.67■□□□□ 0.58
Pcdhgb2Q91XX7 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb2Q91XX7 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.67■□□□□ 0.58
Pcdhgb2Q91XX7 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Pcdhgb2Q91XX7 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.67■□□□□ 0.58
Pcdhgb2Q91XX7 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.67■□□□□ 0.58
Pcdhgb2Q91XX7 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.67■□□□□ 0.58
Pcdhgb2Q91XX7 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb2Q91XX7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb2Q91XX7 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb2Q91XX7 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Pcdhgb2Q91XX7 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb2Q91XX7 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb2Q91XX7 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgb2Q91XX7 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgb2Q91XX7 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgb2Q91XX7 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.66■□□□□ 0.58
Pcdhgb2Q91XX7 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgb2Q91XX7 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgb2Q91XX7 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgb2Q91XX7 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgb2Q91XX7 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgb2Q91XX7 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Pcdhgb2Q91XX7 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgb2Q91XX7 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgb2Q91XX7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgb2Q91XX7 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgb2Q91XX7 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.65■□□□□ 0.58
Pcdhgb2Q91XX7 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgb2Q91XX7 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Pcdhgb2Q91XX7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdhgb2Q91XX7 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.64■□□□□ 0.57
Pcdhgb2Q91XX7 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgb2Q91XX7 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.64■□□□□ 0.57
Pcdhgb2Q91XX7 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgb2Q91XX7 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Pcdhgb2Q91XX7 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgb2Q91XX7 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgb2Q91XX7 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Pcdhgb2Q91XX7 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb2Q91XX7 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb2Q91XX7 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb2Q91XX7 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb2Q91XX7 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.63■□□□□ 0.57
Pcdhgb2Q91XX7 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb2Q91XX7 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb2Q91XX7 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb2Q91XX7 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.63■□□□□ 0.57
Pcdhgb2Q91XX7 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Pcdhgb2Q91XX7 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb2Q91XX7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb2Q91XX7 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Pcdhgb2Q91XX7 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhgb2Q91XX7 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhgb2Q91XX7 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhgb2Q91XX7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhgb2Q91XX7 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhgb2Q91XX7 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhgb2Q91XX7 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhgb2Q91XX7 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgb2Q91XX7 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgb2Q91XX7 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgb2Q91XX7 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Pcdhgb2Q91XX7 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.61■□□□□ 0.57
Pcdhgb2Q91XX7 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgb2Q91XX7 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Pcdhgb2Q91XX7 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgb2Q91XX7 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgb2Q91XX7 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Pcdhgb2Q91XX7 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.61■□□□□ 0.57
Pcdhgb2Q91XX7 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgb2Q91XX7 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhgb2Q91XX7 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Pcdhgb2Q91XX7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhgb2Q91XX7 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Pcdhgb2Q91XX7 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhgb2Q91XX7 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhgb2Q91XX7 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhgb2Q91XX7 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhgb2Q91XX7 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhgb2Q91XX7 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhgb2Q91XX7 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhgb2Q91XX7 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhgb2Q91XX7 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms