Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhgb4Q91XX6 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhgb4Q91XX6 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhgb4Q91XX6 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhgb4Q91XX6 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.1■□□□□ 0.97
Pcdhgb4Q91XX6 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.1■□□□□ 0.97
Pcdhgb4Q91XX6 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhgb4Q91XX6 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhgb4Q91XX6 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
Pcdhgb4Q91XX6 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhgb4Q91XX6 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhgb4Q91XX6 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhgb4Q91XX6 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Pcdhgb4Q91XX6 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhgb4Q91XX6 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.09■□□□□ 0.97
Pcdhgb4Q91XX6 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhgb4Q91XX6 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Pcdhgb4Q91XX6 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.09■□□□□ 0.97
Pcdhgb4Q91XX6 Gm45102-201ENSMUST00000207427 857 ntBASIC21.09■□□□□ 0.97
Pcdhgb4Q91XX6 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Pcdhgb4Q91XX6 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhgb4Q91XX6 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhgb4Q91XX6 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhgb4Q91XX6 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Pcdhgb4Q91XX6 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.09■□□□□ 0.97
Pcdhgb4Q91XX6 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhgb4Q91XX6 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhgb4Q91XX6 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhgb4Q91XX6 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhgb4Q91XX6 Gm43530-201ENSMUST00000195920 274 ntBASIC21.08■□□□□ 0.97
Pcdhgb4Q91XX6 Gm44487-201ENSMUST00000205145 325 ntBASIC21.08■□□□□ 0.97
Pcdhgb4Q91XX6 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Pcdhgb4Q91XX6 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Pcdhgb4Q91XX6 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhgb4Q91XX6 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhgb4Q91XX6 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhgb4Q91XX6 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhgb4Q91XX6 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhgb4Q91XX6 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.07■□□□□ 0.96
Pcdhgb4Q91XX6 Rps24-207ENSMUST00000224568 714 ntBASIC21.07■□□□□ 0.96
Pcdhgb4Q91XX6 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhgb4Q91XX6 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Pcdhgb4Q91XX6 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhgb4Q91XX6 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhgb4Q91XX6 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhgb4Q91XX6 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhgb4Q91XX6 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhgb4Q91XX6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhgb4Q91XX6 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhgb4Q91XX6 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.06■□□□□ 0.96
Pcdhgb4Q91XX6 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhgb4Q91XX6 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhgb4Q91XX6 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.05■□□□□ 0.96
Pcdhgb4Q91XX6 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhgb4Q91XX6 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Pcdhgb4Q91XX6 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhgb4Q91XX6 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhgb4Q91XX6 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Pcdhgb4Q91XX6 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhgb4Q91XX6 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Pcdhgb4Q91XX6 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.04■□□□□ 0.96
Pcdhgb4Q91XX6 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.04■□□□□ 0.96
Pcdhgb4Q91XX6 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhgb4Q91XX6 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhgb4Q91XX6 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhgb4Q91XX6 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.04■□□□□ 0.96
Pcdhgb4Q91XX6 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhgb4Q91XX6 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhgb4Q91XX6 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhgb4Q91XX6 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhgb4Q91XX6 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhgb4Q91XX6 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhgb4Q91XX6 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhgb4Q91XX6 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhgb4Q91XX6 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhgb4Q91XX6 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhgb4Q91XX6 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhgb4Q91XX6 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhgb4Q91XX6 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhgb4Q91XX6 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhgb4Q91XX6 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhgb4Q91XX6 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.02■□□□□ 0.96
Pcdhgb4Q91XX6 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
Pcdhgb4Q91XX6 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhgb4Q91XX6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhgb4Q91XX6 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
Pcdhgb4Q91XX6 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhgb4Q91XX6 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.01■□□□□ 0.95
Pcdhgb4Q91XX6 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhgb4Q91XX6 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhgb4Q91XX6 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhgb4Q91XX6 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhgb4Q91XX6 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Pcdhgb4Q91XX6 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhgb4Q91XX6 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhgb4Q91XX6 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdhgb4Q91XX6 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21■□□□□ 0.95
Pcdhgb4Q91XX6 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
Pcdhgb4Q91XX6 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhgb4Q91XX6 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms