Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdhgc5Q91XW9 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdhgc5Q91XW9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdhgc5Q91XW9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdhgc5Q91XW9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC22.7■■□□□ 1.22
Pcdhgc5Q91XW9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC22.7■■□□□ 1.22
Pcdhgc5Q91XW9 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC22.69■■□□□ 1.22
Pcdhgc5Q91XW9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhgc5Q91XW9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Pcdhgc5Q91XW9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhgc5Q91XW9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhgc5Q91XW9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC22.69■■□□□ 1.22
Pcdhgc5Q91XW9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhgc5Q91XW9 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.69■■□□□ 1.22
Pcdhgc5Q91XW9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhgc5Q91XW9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhgc5Q91XW9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhgc5Q91XW9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhgc5Q91XW9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC22.68■■□□□ 1.22
Pcdhgc5Q91XW9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhgc5Q91XW9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhgc5Q91XW9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
Pcdhgc5Q91XW9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC22.68■■□□□ 1.22
Pcdhgc5Q91XW9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC22.68■■□□□ 1.22
Pcdhgc5Q91XW9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhgc5Q91XW9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhgc5Q91XW9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC22.68■■□□□ 1.22
Pcdhgc5Q91XW9 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhgc5Q91XW9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC22.68■■□□□ 1.22
Pcdhgc5Q91XW9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC22.68■■□□□ 1.22
Pcdhgc5Q91XW9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhgc5Q91XW9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhgc5Q91XW9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhgc5Q91XW9 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhgc5Q91XW9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhgc5Q91XW9 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Pcdhgc5Q91XW9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhgc5Q91XW9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC22.67■■□□□ 1.22
Pcdhgc5Q91XW9 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhgc5Q91XW9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Pcdhgc5Q91XW9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhgc5Q91XW9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhgc5Q91XW9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC22.66■■□□□ 1.22
Pcdhgc5Q91XW9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC22.66■■□□□ 1.22
Pcdhgc5Q91XW9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC22.66■■□□□ 1.22
Pcdhgc5Q91XW9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC22.66■■□□□ 1.22
Pcdhgc5Q91XW9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhgc5Q91XW9 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Pcdhgc5Q91XW9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhgc5Q91XW9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhgc5Q91XW9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Pcdhgc5Q91XW9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Pcdhgc5Q91XW9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhgc5Q91XW9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Pcdhgc5Q91XW9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhgc5Q91XW9 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhgc5Q91XW9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhgc5Q91XW9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhgc5Q91XW9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC22.65■■□□□ 1.22
Pcdhgc5Q91XW9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC22.65■■□□□ 1.22
Pcdhgc5Q91XW9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Pcdhgc5Q91XW9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Pcdhgc5Q91XW9 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.22
Pcdhgc5Q91XW9 Gm10129-202ENSMUST00000193100 1316 ntBASIC22.64■■□□□ 1.22
Pcdhgc5Q91XW9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdhgc5Q91XW9 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdhgc5Q91XW9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdhgc5Q91XW9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdhgc5Q91XW9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Pcdhgc5Q91XW9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC22.64■■□□□ 1.21
Pcdhgc5Q91XW9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdhgc5Q91XW9 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Pcdhgc5Q91XW9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhgc5Q91XW9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhgc5Q91XW9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC22.63■■□□□ 1.21
Pcdhgc5Q91XW9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhgc5Q91XW9 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhgc5Q91XW9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhgc5Q91XW9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhgc5Q91XW9 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
Pcdhgc5Q91XW9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC22.62■■□□□ 1.21
Pcdhgc5Q91XW9 Gm43530-201ENSMUST00000195920 274 ntBASIC22.62■■□□□ 1.21
Pcdhgc5Q91XW9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC22.62■■□□□ 1.21
Pcdhgc5Q91XW9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhgc5Q91XW9 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhgc5Q91XW9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhgc5Q91XW9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhgc5Q91XW9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhgc5Q91XW9 Golph3-202ENSMUST00000226517 2359 ntBASIC22.61■■□□□ 1.21
Pcdhgc5Q91XW9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhgc5Q91XW9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhgc5Q91XW9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhgc5Q91XW9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhgc5Q91XW9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Pcdhgc5Q91XW9 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhgc5Q91XW9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhgc5Q91XW9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhgc5Q91XW9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC22.6■■□□□ 1.21
Pcdhgc5Q91XW9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhgc5Q91XW9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms