Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Vsx1Q91V10 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vsx1Q91V10 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vsx1Q91V10 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.75■□□□□ 0.75
Vsx1Q91V10 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.75■□□□□ 0.75
Vsx1Q91V10 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.75■□□□□ 0.75
Vsx1Q91V10 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vsx1Q91V10 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vsx1Q91V10 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vsx1Q91V10 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vsx1Q91V10 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.75■□□□□ 0.75
Vsx1Q91V10 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.75■□□□□ 0.75
Vsx1Q91V10 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vsx1Q91V10 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vsx1Q91V10 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vsx1Q91V10 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vsx1Q91V10 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.74■□□□□ 0.75
Vsx1Q91V10 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.74■□□□□ 0.75
Vsx1Q91V10 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vsx1Q91V10 Gm11421-201ENSMUST00000122124 294 ntBASIC19.74■□□□□ 0.75
Vsx1Q91V10 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vsx1Q91V10 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vsx1Q91V10 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Vsx1Q91V10 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vsx1Q91V10 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vsx1Q91V10 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vsx1Q91V10 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vsx1Q91V10 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vsx1Q91V10 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vsx1Q91V10 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vsx1Q91V10 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vsx1Q91V10 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vsx1Q91V10 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vsx1Q91V10 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vsx1Q91V10 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vsx1Q91V10 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Vsx1Q91V10 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Vsx1Q91V10 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vsx1Q91V10 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vsx1Q91V10 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vsx1Q91V10 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vsx1Q91V10 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.72■□□□□ 0.75
Vsx1Q91V10 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vsx1Q91V10 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.72■□□□□ 0.75
Vsx1Q91V10 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vsx1Q91V10 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Vsx1Q91V10 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vsx1Q91V10 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vsx1Q91V10 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vsx1Q91V10 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vsx1Q91V10 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vsx1Q91V10 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.72■□□□□ 0.75
Vsx1Q91V10 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vsx1Q91V10 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
Vsx1Q91V10 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vsx1Q91V10 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Vsx1Q91V10 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vsx1Q91V10 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Vsx1Q91V10 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.71■□□□□ 0.75
Vsx1Q91V10 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Vsx1Q91V10 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Vsx1Q91V10 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vsx1Q91V10 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Vsx1Q91V10 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vsx1Q91V10 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.71■□□□□ 0.75
Vsx1Q91V10 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Vsx1Q91V10 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vsx1Q91V10 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.7■□□□□ 0.74
Vsx1Q91V10 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vsx1Q91V10 Gm9988-201ENSMUST00000069786 435 ntBASIC19.7■□□□□ 0.74
Vsx1Q91V10 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vsx1Q91V10 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vsx1Q91V10 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vsx1Q91V10 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vsx1Q91V10 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vsx1Q91V10 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Vsx1Q91V10 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.69■□□□□ 0.74
Vsx1Q91V10 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Vsx1Q91V10 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.69■□□□□ 0.74
Vsx1Q91V10 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.69■□□□□ 0.74
Vsx1Q91V10 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Vsx1Q91V10 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Vsx1Q91V10 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vsx1Q91V10 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vsx1Q91V10 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vsx1Q91V10 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.68■□□□□ 0.74
Vsx1Q91V10 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
Vsx1Q91V10 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vsx1Q91V10 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Vsx1Q91V10 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.67■□□□□ 0.74
Vsx1Q91V10 Gm12441-201ENSMUST00000121806 588 ntBASIC19.67■□□□□ 0.74
Vsx1Q91V10 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vsx1Q91V10 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vsx1Q91V10 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.67■□□□□ 0.74
Vsx1Q91V10 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vsx1Q91V10 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vsx1Q91V10 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.67■□□□□ 0.74
Vsx1Q91V10 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vsx1Q91V10 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Vsx1Q91V10 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms