Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
StrcQ8VIM6 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC24.42■■□□□ 1.5
StrcQ8VIM6 Gm13168-201ENSMUST00000121771 632 ntBASIC24.42■■□□□ 1.5
StrcQ8VIM6 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC24.42■■□□□ 1.5
StrcQ8VIM6 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC24.42■■□□□ 1.5
StrcQ8VIM6 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
StrcQ8VIM6 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
StrcQ8VIM6 Gm6211-202ENSMUST00000167849 925 ntBASIC24.41■■□□□ 1.5
StrcQ8VIM6 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
StrcQ8VIM6 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
StrcQ8VIM6 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
StrcQ8VIM6 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
StrcQ8VIM6 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
StrcQ8VIM6 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
StrcQ8VIM6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
StrcQ8VIM6 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC24.4■■□□□ 1.5
StrcQ8VIM6 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
StrcQ8VIM6 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC24.4■■□□□ 1.5
StrcQ8VIM6 AC122769.4-201ENSMUST00000228166 901 ntBASIC24.4■■□□□ 1.5
StrcQ8VIM6 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
StrcQ8VIM6 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
StrcQ8VIM6 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
StrcQ8VIM6 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
StrcQ8VIM6 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
StrcQ8VIM6 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
StrcQ8VIM6 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
StrcQ8VIM6 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
StrcQ8VIM6 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.49
StrcQ8VIM6 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC24.39■■□□□ 1.49
StrcQ8VIM6 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
StrcQ8VIM6 Gm5408-201ENSMUST00000197998 747 ntBASIC24.39■■□□□ 1.49
StrcQ8VIM6 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC24.39■■□□□ 1.49
StrcQ8VIM6 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC24.39■■□□□ 1.49
StrcQ8VIM6 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
StrcQ8VIM6 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
StrcQ8VIM6 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
StrcQ8VIM6 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
StrcQ8VIM6 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
StrcQ8VIM6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
StrcQ8VIM6 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
StrcQ8VIM6 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
StrcQ8VIM6 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
StrcQ8VIM6 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
StrcQ8VIM6 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
StrcQ8VIM6 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
StrcQ8VIM6 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC24.38■■□□□ 1.49
StrcQ8VIM6 Gm8520-201ENSMUST00000186517 868 ntBASIC24.38■■□□□ 1.49
StrcQ8VIM6 Gm43403-201ENSMUST00000198011 1786 ntBASIC24.37■■□□□ 1.49
StrcQ8VIM6 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
StrcQ8VIM6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
StrcQ8VIM6 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
StrcQ8VIM6 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
StrcQ8VIM6 Gm20049-201ENSMUST00000219950 730 ntBASIC24.37■■□□□ 1.49
StrcQ8VIM6 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
StrcQ8VIM6 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
StrcQ8VIM6 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
StrcQ8VIM6 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
StrcQ8VIM6 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
StrcQ8VIM6 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
StrcQ8VIM6 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
StrcQ8VIM6 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC24.36■■□□□ 1.49
StrcQ8VIM6 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
StrcQ8VIM6 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
StrcQ8VIM6 Gm5913-201ENSMUST00000119397 1399 ntBASIC24.36■■□□□ 1.49
StrcQ8VIM6 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
StrcQ8VIM6 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
StrcQ8VIM6 Gm37856-201ENSMUST00000191634 999 ntBASIC24.35■■□□□ 1.49
StrcQ8VIM6 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
StrcQ8VIM6 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC24.34■■□□□ 1.49
StrcQ8VIM6 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
StrcQ8VIM6 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
StrcQ8VIM6 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC24.34■■□□□ 1.49
StrcQ8VIM6 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC24.34■■□□□ 1.49
StrcQ8VIM6 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
StrcQ8VIM6 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
StrcQ8VIM6 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
StrcQ8VIM6 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC24.33■■□□□ 1.49
StrcQ8VIM6 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
StrcQ8VIM6 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
StrcQ8VIM6 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
StrcQ8VIM6 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
StrcQ8VIM6 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
StrcQ8VIM6 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
StrcQ8VIM6 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
StrcQ8VIM6 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
StrcQ8VIM6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
StrcQ8VIM6 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.48
StrcQ8VIM6 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC24.32■■□□□ 1.48
StrcQ8VIM6 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
StrcQ8VIM6 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
StrcQ8VIM6 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
StrcQ8VIM6 Il17rd-202ENSMUST00000223942 2186 ntBASIC24.31■■□□□ 1.48
StrcQ8VIM6 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
StrcQ8VIM6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
StrcQ8VIM6 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
StrcQ8VIM6 Gm7290-201ENSMUST00000104990 617 ntBASIC24.31■■□□□ 1.48
StrcQ8VIM6 Gm12918-201ENSMUST00000120234 636 ntBASIC24.31■■□□□ 1.48
StrcQ8VIM6 Gm15710-201ENSMUST00000121821 636 ntBASIC24.31■■□□□ 1.48
StrcQ8VIM6 Gm5075-201ENSMUST00000196916 622 ntBASIC24.31■■□□□ 1.48
StrcQ8VIM6 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC24.31■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms