Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Odf4Q8VI88 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Odf4Q8VI88 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Odf4Q8VI88 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.63■□□□□ 0.41
Odf4Q8VI88 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Odf4Q8VI88 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Odf4Q8VI88 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.62■□□□□ 0.41
Odf4Q8VI88 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Odf4Q8VI88 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Odf4Q8VI88 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Odf4Q8VI88 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Odf4Q8VI88 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Odf4Q8VI88 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.62■□□□□ 0.41
Odf4Q8VI88 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Odf4Q8VI88 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Odf4Q8VI88 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Odf4Q8VI88 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Odf4Q8VI88 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Odf4Q8VI88 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.61■□□□□ 0.41
Odf4Q8VI88 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.61■□□□□ 0.41
Odf4Q8VI88 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Odf4Q8VI88 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.61■□□□□ 0.41
Odf4Q8VI88 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Odf4Q8VI88 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Odf4Q8VI88 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Odf4Q8VI88 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Odf4Q8VI88 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Odf4Q8VI88 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Odf4Q8VI88 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.6■□□□□ 0.41
Odf4Q8VI88 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.6■□□□□ 0.41
Odf4Q8VI88 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Odf4Q8VI88 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Odf4Q8VI88 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Odf4Q8VI88 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Odf4Q8VI88 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Odf4Q8VI88 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Odf4Q8VI88 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Odf4Q8VI88 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Odf4Q8VI88 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Odf4Q8VI88 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Odf4Q8VI88 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Odf4Q8VI88 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Odf4Q8VI88 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Odf4Q8VI88 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Odf4Q8VI88 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Odf4Q8VI88 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.59■□□□□ 0.41
Odf4Q8VI88 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.59■□□□□ 0.41
Odf4Q8VI88 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Odf4Q8VI88 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Odf4Q8VI88 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Odf4Q8VI88 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Odf4Q8VI88 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.59■□□□□ 0.41
Odf4Q8VI88 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Odf4Q8VI88 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Odf4Q8VI88 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Odf4Q8VI88 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Odf4Q8VI88 Gm27454-201ENSMUST00000185090 204 ntBASIC17.58■□□□□ 0.4
Odf4Q8VI88 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Odf4Q8VI88 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Odf4Q8VI88 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.58■□□□□ 0.4
Odf4Q8VI88 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Odf4Q8VI88 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Odf4Q8VI88 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Odf4Q8VI88 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Odf4Q8VI88 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Odf4Q8VI88 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Odf4Q8VI88 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Odf4Q8VI88 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Odf4Q8VI88 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.57■□□□□ 0.4
Odf4Q8VI88 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Odf4Q8VI88 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Odf4Q8VI88 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Odf4Q8VI88 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Odf4Q8VI88 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Odf4Q8VI88 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Odf4Q8VI88 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Odf4Q8VI88 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Odf4Q8VI88 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.57■□□□□ 0.4
Odf4Q8VI88 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Odf4Q8VI88 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Odf4Q8VI88 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Odf4Q8VI88 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Odf4Q8VI88 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Odf4Q8VI88 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.56■□□□□ 0.4
Odf4Q8VI88 Gm45417-201ENSMUST00000209533 758 ntBASIC17.56■□□□□ 0.4
Odf4Q8VI88 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.56■□□□□ 0.4
Odf4Q8VI88 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Odf4Q8VI88 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Odf4Q8VI88 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Odf4Q8VI88 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Odf4Q8VI88 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Odf4Q8VI88 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Odf4Q8VI88 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.55■□□□□ 0.4
Odf4Q8VI88 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.55■□□□□ 0.4
Odf4Q8VI88 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Odf4Q8VI88 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.55■□□□□ 0.4
Odf4Q8VI88 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Odf4Q8VI88 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Odf4Q8VI88 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Odf4Q8VI88 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms