Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Nkd2Q8VE28 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nkd2Q8VE28 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nkd2Q8VE28 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nkd2Q8VE28 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.08■□□□□ 0.48
Nkd2Q8VE28 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.08■□□□□ 0.48
Nkd2Q8VE28 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nkd2Q8VE28 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nkd2Q8VE28 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nkd2Q8VE28 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkd2Q8VE28 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.07■□□□□ 0.48
Nkd2Q8VE28 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkd2Q8VE28 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.07■□□□□ 0.48
Nkd2Q8VE28 Gm8495-201ENSMUST00000188740 694 ntBASIC18.07■□□□□ 0.48
Nkd2Q8VE28 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Nkd2Q8VE28 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkd2Q8VE28 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.07■□□□□ 0.48
Nkd2Q8VE28 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.07■□□□□ 0.48
Nkd2Q8VE28 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Nkd2Q8VE28 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkd2Q8VE28 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nkd2Q8VE28 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkd2Q8VE28 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkd2Q8VE28 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkd2Q8VE28 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nkd2Q8VE28 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Nkd2Q8VE28 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkd2Q8VE28 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkd2Q8VE28 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkd2Q8VE28 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkd2Q8VE28 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkd2Q8VE28 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkd2Q8VE28 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkd2Q8VE28 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Nkd2Q8VE28 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nkd2Q8VE28 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.05■□□□□ 0.48
Nkd2Q8VE28 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkd2Q8VE28 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkd2Q8VE28 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkd2Q8VE28 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkd2Q8VE28 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nkd2Q8VE28 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkd2Q8VE28 Golph3-202ENSMUST00000226517 2359 ntBASIC18.04■□□□□ 0.48
Nkd2Q8VE28 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkd2Q8VE28 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkd2Q8VE28 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Nkd2Q8VE28 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nkd2Q8VE28 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkd2Q8VE28 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Nkd2Q8VE28 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.04■□□□□ 0.48
Nkd2Q8VE28 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkd2Q8VE28 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkd2Q8VE28 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Nkd2Q8VE28 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkd2Q8VE28 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkd2Q8VE28 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.04■□□□□ 0.48
Nkd2Q8VE28 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkd2Q8VE28 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkd2Q8VE28 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkd2Q8VE28 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkd2Q8VE28 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkd2Q8VE28 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.03■□□□□ 0.48
Nkd2Q8VE28 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkd2Q8VE28 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Nkd2Q8VE28 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Nkd2Q8VE28 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkd2Q8VE28 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Nkd2Q8VE28 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Nkd2Q8VE28 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
Nkd2Q8VE28 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkd2Q8VE28 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Nkd2Q8VE28 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nkd2Q8VE28 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nkd2Q8VE28 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkd2Q8VE28 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nkd2Q8VE28 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nkd2Q8VE28 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nkd2Q8VE28 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Nkd2Q8VE28 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.02■□□□□ 0.48
Nkd2Q8VE28 Gm18284-201ENSMUST00000172604 624 ntBASIC18.02■□□□□ 0.48
Nkd2Q8VE28 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nkd2Q8VE28 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nkd2Q8VE28 Gm6139-201ENSMUST00000079261 882 ntBASIC18.02■□□□□ 0.48
Nkd2Q8VE28 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nkd2Q8VE28 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nkd2Q8VE28 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nkd2Q8VE28 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Nkd2Q8VE28 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
Nkd2Q8VE28 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nkd2Q8VE28 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nkd2Q8VE28 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Nkd2Q8VE28 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.01■□□□□ 0.47
Nkd2Q8VE28 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Nkd2Q8VE28 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nkd2Q8VE28 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nkd2Q8VE28 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nkd2Q8VE28 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.01■□□□□ 0.47
Nkd2Q8VE28 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.01■□□□□ 0.47
Nkd2Q8VE28 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Nkd2Q8VE28 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms