Protein–RNA interactions for Protein: Q8VDB9

Slc6a20a, Sodium- and chloride-dependent transporter XTRP3A, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20aQ8VDB9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Slc6a20aQ8VDB9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Slc6a20aQ8VDB9 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Slc6a20aQ8VDB9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc6a20aQ8VDB9 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Slc6a20aQ8VDB9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Slc6a20aQ8VDB9 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc6a20aQ8VDB9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Slc6a20aQ8VDB9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc6a20aQ8VDB9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Slc6a20aQ8VDB9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc6a20aQ8VDB9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc6a20aQ8VDB9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc6a20aQ8VDB9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc6a20aQ8VDB9 Mir6236-201ENSMUST00000184437 123 ntBASIC19.67■□□□□ 0.74
Slc6a20aQ8VDB9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc6a20aQ8VDB9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Slc6a20aQ8VDB9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Slc6a20aQ8VDB9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Slc6a20aQ8VDB9 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Slc6a20aQ8VDB9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc6a20aQ8VDB9 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.66■□□□□ 0.74
Slc6a20aQ8VDB9 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.66■□□□□ 0.74
Slc6a20aQ8VDB9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc6a20aQ8VDB9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Slc6a20aQ8VDB9 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Slc6a20aQ8VDB9 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.65■□□□□ 0.74
Slc6a20aQ8VDB9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.65■□□□□ 0.74
Slc6a20aQ8VDB9 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.65■□□□□ 0.74
Slc6a20aQ8VDB9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Slc6a20aQ8VDB9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc6a20aQ8VDB9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Slc6a20aQ8VDB9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Slc6a20aQ8VDB9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Slc6a20aQ8VDB9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Slc6a20aQ8VDB9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Slc6a20aQ8VDB9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.64■□□□□ 0.73
Slc6a20aQ8VDB9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc6a20aQ8VDB9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Slc6a20aQ8VDB9 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Slc6a20aQ8VDB9 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc6a20aQ8VDB9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc6a20aQ8VDB9 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc6a20aQ8VDB9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Slc6a20aQ8VDB9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc6a20aQ8VDB9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
Slc6a20aQ8VDB9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc6a20aQ8VDB9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc6a20aQ8VDB9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc6a20aQ8VDB9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc6a20aQ8VDB9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Slc6a20aQ8VDB9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Slc6a20aQ8VDB9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Slc6a20aQ8VDB9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Slc6a20aQ8VDB9 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc6a20aQ8VDB9 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc6a20aQ8VDB9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.63■□□□□ 0.73
Slc6a20aQ8VDB9 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.63■□□□□ 0.73
Slc6a20aQ8VDB9 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Slc6a20aQ8VDB9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Slc6a20aQ8VDB9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc6a20aQ8VDB9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc6a20aQ8VDB9 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Slc6a20aQ8VDB9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc6a20aQ8VDB9 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Slc6a20aQ8VDB9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc6a20aQ8VDB9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Slc6a20aQ8VDB9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc6a20aQ8VDB9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Slc6a20aQ8VDB9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc6a20aQ8VDB9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.61■□□□□ 0.73
Slc6a20aQ8VDB9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc6a20aQ8VDB9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc6a20aQ8VDB9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc6a20aQ8VDB9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Slc6a20aQ8VDB9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc6a20aQ8VDB9 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc6a20aQ8VDB9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc6a20aQ8VDB9 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc6a20aQ8VDB9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Slc6a20aQ8VDB9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc6a20aQ8VDB9 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc6a20aQ8VDB9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc6a20aQ8VDB9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc6a20aQ8VDB9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc6a20aQ8VDB9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc6a20aQ8VDB9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Slc6a20aQ8VDB9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc6a20aQ8VDB9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc6a20aQ8VDB9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc6a20aQ8VDB9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Slc6a20aQ8VDB9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Slc6a20aQ8VDB9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc6a20aQ8VDB9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc6a20aQ8VDB9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Slc6a20aQ8VDB9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Slc6a20aQ8VDB9 Golph3-202ENSMUST00000226517 2359 ntBASIC19.58■□□□□ 0.73
Slc6a20aQ8VDB9 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Slc6a20aQ8VDB9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.58■□□□□ 0.73
Slc6a20aQ8VDB9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 9.9 ms