Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Ndc1Q8VCB1 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Ndc1Q8VCB1 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.77■□□□□ 0.59
Ndc1Q8VCB1 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ndc1Q8VCB1 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ndc1Q8VCB1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ndc1Q8VCB1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ndc1Q8VCB1 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ndc1Q8VCB1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
Ndc1Q8VCB1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ndc1Q8VCB1 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.76■□□□□ 0.59
Ndc1Q8VCB1 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ndc1Q8VCB1 Spcs1-204ENSMUST00000226782 949 ntBASIC18.76■□□□□ 0.59
Ndc1Q8VCB1 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ndc1Q8VCB1 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ndc1Q8VCB1 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ndc1Q8VCB1 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ndc1Q8VCB1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ndc1Q8VCB1 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ndc1Q8VCB1 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ndc1Q8VCB1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ndc1Q8VCB1 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Ndc1Q8VCB1 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.75■□□□□ 0.59
Ndc1Q8VCB1 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.75■□□□□ 0.59
Ndc1Q8VCB1 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ndc1Q8VCB1 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Ndc1Q8VCB1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ndc1Q8VCB1 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ndc1Q8VCB1 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ndc1Q8VCB1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ndc1Q8VCB1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ndc1Q8VCB1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.75■□□□□ 0.59
Ndc1Q8VCB1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ndc1Q8VCB1 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ndc1Q8VCB1 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ndc1Q8VCB1 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ndc1Q8VCB1 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ndc1Q8VCB1 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Ndc1Q8VCB1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ndc1Q8VCB1 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ndc1Q8VCB1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ndc1Q8VCB1 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ndc1Q8VCB1 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ndc1Q8VCB1 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ndc1Q8VCB1 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ndc1Q8VCB1 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
Ndc1Q8VCB1 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ndc1Q8VCB1 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ndc1Q8VCB1 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ndc1Q8VCB1 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ndc1Q8VCB1 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ndc1Q8VCB1 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ndc1Q8VCB1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ndc1Q8VCB1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ndc1Q8VCB1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.72■□□□□ 0.59
Ndc1Q8VCB1 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ndc1Q8VCB1 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ndc1Q8VCB1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ndc1Q8VCB1 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ndc1Q8VCB1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ndc1Q8VCB1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ndc1Q8VCB1 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ndc1Q8VCB1 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ndc1Q8VCB1 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ndc1Q8VCB1 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ndc1Q8VCB1 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ndc1Q8VCB1 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.71■□□□□ 0.59
Ndc1Q8VCB1 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ndc1Q8VCB1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ndc1Q8VCB1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.71■□□□□ 0.59
Ndc1Q8VCB1 Gm18284-201ENSMUST00000172604 624 ntBASIC18.71■□□□□ 0.59
Ndc1Q8VCB1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.71■□□□□ 0.59
Ndc1Q8VCB1 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ndc1Q8VCB1 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.71■□□□□ 0.58
Ndc1Q8VCB1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ndc1Q8VCB1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ndc1Q8VCB1 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ndc1Q8VCB1 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ndc1Q8VCB1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Ndc1Q8VCB1 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ndc1Q8VCB1 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ndc1Q8VCB1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.69■□□□□ 0.58
Ndc1Q8VCB1 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Ndc1Q8VCB1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.69■□□□□ 0.58
Ndc1Q8VCB1 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.69■□□□□ 0.58
Ndc1Q8VCB1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.69■□□□□ 0.58
Ndc1Q8VCB1 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ndc1Q8VCB1 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ndc1Q8VCB1 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ndc1Q8VCB1 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ndc1Q8VCB1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Ndc1Q8VCB1 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ndc1Q8VCB1 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ndc1Q8VCB1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.68■□□□□ 0.58
Ndc1Q8VCB1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ndc1Q8VCB1 Gm8495-201ENSMUST00000188740 694 ntBASIC18.68■□□□□ 0.58
Ndc1Q8VCB1 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ndc1Q8VCB1 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ndc1Q8VCB1 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ndc1Q8VCB1 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms