Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf8Q8VC56 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf8Q8VC56 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf8Q8VC56 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.1■□□□□ 0.65
Rnf8Q8VC56 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf8Q8VC56 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf8Q8VC56 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf8Q8VC56 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf8Q8VC56 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf8Q8VC56 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf8Q8VC56 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.09■□□□□ 0.65
Rnf8Q8VC56 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
Rnf8Q8VC56 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.09■□□□□ 0.65
Rnf8Q8VC56 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Rnf8Q8VC56 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.08■□□□□ 0.65
Rnf8Q8VC56 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Rnf8Q8VC56 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rnf8Q8VC56 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Rnf8Q8VC56 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Rnf8Q8VC56 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.08■□□□□ 0.64
Rnf8Q8VC56 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.64
Rnf8Q8VC56 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rnf8Q8VC56 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf8Q8VC56 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf8Q8VC56 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.07■□□□□ 0.64
Rnf8Q8VC56 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf8Q8VC56 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf8Q8VC56 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf8Q8VC56 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.07■□□□□ 0.64
Rnf8Q8VC56 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf8Q8VC56 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf8Q8VC56 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf8Q8VC56 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf8Q8VC56 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Rnf8Q8VC56 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf8Q8VC56 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Rnf8Q8VC56 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf8Q8VC56 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf8Q8VC56 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf8Q8VC56 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf8Q8VC56 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.06■□□□□ 0.64
Rnf8Q8VC56 Gm22238-201ENSMUST00000175222 88 ntBASIC19.06■□□□□ 0.64
Rnf8Q8VC56 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Rnf8Q8VC56 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf8Q8VC56 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf8Q8VC56 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf8Q8VC56 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf8Q8VC56 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Rnf8Q8VC56 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf8Q8VC56 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Rnf8Q8VC56 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf8Q8VC56 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf8Q8VC56 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.05■□□□□ 0.64
Rnf8Q8VC56 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Rnf8Q8VC56 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.05■□□□□ 0.64
Rnf8Q8VC56 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.05■□□□□ 0.64
Rnf8Q8VC56 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf8Q8VC56 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf8Q8VC56 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf8Q8VC56 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf8Q8VC56 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Rnf8Q8VC56 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf8Q8VC56 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Rnf8Q8VC56 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Rnf8Q8VC56 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf8Q8VC56 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf8Q8VC56 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.04■□□□□ 0.64
Rnf8Q8VC56 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.04■□□□□ 0.64
Rnf8Q8VC56 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf8Q8VC56 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf8Q8VC56 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Rnf8Q8VC56 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf8Q8VC56 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf8Q8VC56 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf8Q8VC56 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf8Q8VC56 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.03■□□□□ 0.64
Rnf8Q8VC56 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.03■□□□□ 0.64
Rnf8Q8VC56 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.03■□□□□ 0.64
Rnf8Q8VC56 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
Rnf8Q8VC56 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf8Q8VC56 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf8Q8VC56 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Rnf8Q8VC56 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf8Q8VC56 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf8Q8VC56 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.02■□□□□ 0.63
Rnf8Q8VC56 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rnf8Q8VC56 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rnf8Q8VC56 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rnf8Q8VC56 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
Rnf8Q8VC56 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Rnf8Q8VC56 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf8Q8VC56 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.01■□□□□ 0.63
Rnf8Q8VC56 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf8Q8VC56 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf8Q8VC56 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.01■□□□□ 0.63
Rnf8Q8VC56 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Rnf8Q8VC56 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Rnf8Q8VC56 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf8Q8VC56 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Rnf8Q8VC56 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms