Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chrna3Q8R4G9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chrna3Q8R4G9 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.54■□□□□ 0.72
Chrna3Q8R4G9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Chrna3Q8R4G9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Chrna3Q8R4G9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chrna3Q8R4G9 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chrna3Q8R4G9 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chrna3Q8R4G9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chrna3Q8R4G9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chrna3Q8R4G9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chrna3Q8R4G9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
Chrna3Q8R4G9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Chrna3Q8R4G9 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.53■□□□□ 0.72
Chrna3Q8R4G9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Chrna3Q8R4G9 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Chrna3Q8R4G9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.53■□□□□ 0.72
Chrna3Q8R4G9 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chrna3Q8R4G9 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.53■□□□□ 0.72
Chrna3Q8R4G9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chrna3Q8R4G9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chrna3Q8R4G9 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chrna3Q8R4G9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chrna3Q8R4G9 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
Chrna3Q8R4G9 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Chrna3Q8R4G9 Gm43017-201ENSMUST00000198296 752 ntBASIC19.52■□□□□ 0.72
Chrna3Q8R4G9 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.52■□□□□ 0.72
Chrna3Q8R4G9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Chrna3Q8R4G9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Chrna3Q8R4G9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
Chrna3Q8R4G9 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.52■□□□□ 0.72
Chrna3Q8R4G9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Chrna3Q8R4G9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Chrna3Q8R4G9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chrna3Q8R4G9 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chrna3Q8R4G9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.51■□□□□ 0.71
Chrna3Q8R4G9 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.51■□□□□ 0.71
Chrna3Q8R4G9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chrna3Q8R4G9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chrna3Q8R4G9 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chrna3Q8R4G9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Chrna3Q8R4G9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Chrna3Q8R4G9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Chrna3Q8R4G9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chrna3Q8R4G9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chrna3Q8R4G9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chrna3Q8R4G9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chrna3Q8R4G9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chrna3Q8R4G9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Chrna3Q8R4G9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Chrna3Q8R4G9 Gm43173-201ENSMUST00000202246 593 ntBASIC19.5■□□□□ 0.71
Chrna3Q8R4G9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.5■□□□□ 0.71
Chrna3Q8R4G9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chrna3Q8R4G9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chrna3Q8R4G9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chrna3Q8R4G9 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chrna3Q8R4G9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Chrna3Q8R4G9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chrna3Q8R4G9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Chrna3Q8R4G9 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chrna3Q8R4G9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.49■□□□□ 0.71
Chrna3Q8R4G9 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.49■□□□□ 0.71
Chrna3Q8R4G9 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Chrna3Q8R4G9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.49■□□□□ 0.71
Chrna3Q8R4G9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chrna3Q8R4G9 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Chrna3Q8R4G9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chrna3Q8R4G9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
Chrna3Q8R4G9 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Chrna3Q8R4G9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Chrna3Q8R4G9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chrna3Q8R4G9 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chrna3Q8R4G9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Chrna3Q8R4G9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chrna3Q8R4G9 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chrna3Q8R4G9 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.48■□□□□ 0.71
Chrna3Q8R4G9 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.48■□□□□ 0.71
Chrna3Q8R4G9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chrna3Q8R4G9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chrna3Q8R4G9 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chrna3Q8R4G9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Chrna3Q8R4G9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chrna3Q8R4G9 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Chrna3Q8R4G9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Chrna3Q8R4G9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Chrna3Q8R4G9 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chrna3Q8R4G9 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Chrna3Q8R4G9 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Chrna3Q8R4G9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Chrna3Q8R4G9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chrna3Q8R4G9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chrna3Q8R4G9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chrna3Q8R4G9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chrna3Q8R4G9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Chrna3Q8R4G9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.46■□□□□ 0.71
Chrna3Q8R4G9 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Chrna3Q8R4G9 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
Chrna3Q8R4G9 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.46■□□□□ 0.71
Chrna3Q8R4G9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chrna3Q8R4G9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms