Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc58Q8R3Q6 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc58Q8R3Q6 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.75■□□□□ 0.43
Ccdc58Q8R3Q6 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ccdc58Q8R3Q6 Gm10420-201ENSMUST00000121713 882 ntBASIC17.75■□□□□ 0.43
Ccdc58Q8R3Q6 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.75■□□□□ 0.43
Ccdc58Q8R3Q6 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Ccdc58Q8R3Q6 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc58Q8R3Q6 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc58Q8R3Q6 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc58Q8R3Q6 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc58Q8R3Q6 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc58Q8R3Q6 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc58Q8R3Q6 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.74■□□□□ 0.43
Ccdc58Q8R3Q6 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Ccdc58Q8R3Q6 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Ccdc58Q8R3Q6 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc58Q8R3Q6 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc58Q8R3Q6 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc58Q8R3Q6 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc58Q8R3Q6 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc58Q8R3Q6 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Ccdc58Q8R3Q6 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc58Q8R3Q6 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc58Q8R3Q6 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Ccdc58Q8R3Q6 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc58Q8R3Q6 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Ccdc58Q8R3Q6 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.73■□□□□ 0.43
Ccdc58Q8R3Q6 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.73■□□□□ 0.43
Ccdc58Q8R3Q6 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.73■□□□□ 0.43
Ccdc58Q8R3Q6 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.73■□□□□ 0.43
Ccdc58Q8R3Q6 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.73■□□□□ 0.43
Ccdc58Q8R3Q6 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc58Q8R3Q6 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.73■□□□□ 0.43
Ccdc58Q8R3Q6 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc58Q8R3Q6 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Ccdc58Q8R3Q6 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc58Q8R3Q6 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.72■□□□□ 0.43
Ccdc58Q8R3Q6 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ccdc58Q8R3Q6 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ccdc58Q8R3Q6 Grk6-206ENSMUST00000224995 2971 ntBASIC17.72■□□□□ 0.43
Ccdc58Q8R3Q6 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Ccdc58Q8R3Q6 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc58Q8R3Q6 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc58Q8R3Q6 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Ccdc58Q8R3Q6 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.72■□□□□ 0.43
Ccdc58Q8R3Q6 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc58Q8R3Q6 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc58Q8R3Q6 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc58Q8R3Q6 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc58Q8R3Q6 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc58Q8R3Q6 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc58Q8R3Q6 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc58Q8R3Q6 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc58Q8R3Q6 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.71■□□□□ 0.43
Ccdc58Q8R3Q6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc58Q8R3Q6 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc58Q8R3Q6 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc58Q8R3Q6 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc58Q8R3Q6 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ccdc58Q8R3Q6 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc58Q8R3Q6 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.7■□□□□ 0.42
Ccdc58Q8R3Q6 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Ccdc58Q8R3Q6 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.7■□□□□ 0.42
Ccdc58Q8R3Q6 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc58Q8R3Q6 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Ccdc58Q8R3Q6 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.7■□□□□ 0.42
Ccdc58Q8R3Q6 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.7■□□□□ 0.42
Ccdc58Q8R3Q6 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.7■□□□□ 0.42
Ccdc58Q8R3Q6 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc58Q8R3Q6 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Ccdc58Q8R3Q6 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ccdc58Q8R3Q6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.7■□□□□ 0.42
Ccdc58Q8R3Q6 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc58Q8R3Q6 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ccdc58Q8R3Q6 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc58Q8R3Q6 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc58Q8R3Q6 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc58Q8R3Q6 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc58Q8R3Q6 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Ccdc58Q8R3Q6 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc58Q8R3Q6 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc58Q8R3Q6 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc58Q8R3Q6 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc58Q8R3Q6 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.69■□□□□ 0.42
Ccdc58Q8R3Q6 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc58Q8R3Q6 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc58Q8R3Q6 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc58Q8R3Q6 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc58Q8R3Q6 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc58Q8R3Q6 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc58Q8R3Q6 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc58Q8R3Q6 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.68■□□□□ 0.42
Ccdc58Q8R3Q6 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc58Q8R3Q6 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc58Q8R3Q6 Gm11175-201ENSMUST00000116172 543 ntBASIC17.68■□□□□ 0.42
Ccdc58Q8R3Q6 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc58Q8R3Q6 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc58Q8R3Q6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.68■□□□□ 0.42
Ccdc58Q8R3Q6 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms