Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Nup58Q8R332 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Nup58Q8R332 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Nup58Q8R332 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.28■■□□□ 1
Nup58Q8R332 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Nup58Q8R332 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.28■■□□□ 1
Nup58Q8R332 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nup58Q8R332 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nup58Q8R332 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
Nup58Q8R332 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.27■■□□□ 1
Nup58Q8R332 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nup58Q8R332 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.27■■□□□ 1
Nup58Q8R332 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Nup58Q8R332 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.27■■□□□ 1
Nup58Q8R332 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nup58Q8R332 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.26■□□□□ 0.99
Nup58Q8R332 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nup58Q8R332 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nup58Q8R332 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nup58Q8R332 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Nup58Q8R332 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.26■□□□□ 0.99
Nup58Q8R332 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nup58Q8R332 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nup58Q8R332 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nup58Q8R332 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.25■□□□□ 0.99
Nup58Q8R332 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nup58Q8R332 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
Nup58Q8R332 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.25■□□□□ 0.99
Nup58Q8R332 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nup58Q8R332 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.25■□□□□ 0.99
Nup58Q8R332 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nup58Q8R332 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.25■□□□□ 0.99
Nup58Q8R332 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nup58Q8R332 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Nup58Q8R332 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nup58Q8R332 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nup58Q8R332 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nup58Q8R332 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Nup58Q8R332 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nup58Q8R332 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nup58Q8R332 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Nup58Q8R332 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nup58Q8R332 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
Nup58Q8R332 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nup58Q8R332 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nup58Q8R332 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Nup58Q8R332 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Nup58Q8R332 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.23■□□□□ 0.99
Nup58Q8R332 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Nup58Q8R332 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nup58Q8R332 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Nup58Q8R332 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Nup58Q8R332 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Nup58Q8R332 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nup58Q8R332 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nup58Q8R332 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nup58Q8R332 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Nup58Q8R332 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Nup58Q8R332 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.21■□□□□ 0.99
Nup58Q8R332 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nup58Q8R332 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nup58Q8R332 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.21■□□□□ 0.99
Nup58Q8R332 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.21■□□□□ 0.99
Nup58Q8R332 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.21■□□□□ 0.99
Nup58Q8R332 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.21■□□□□ 0.99
Nup58Q8R332 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.21■□□□□ 0.99
Nup58Q8R332 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nup58Q8R332 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nup58Q8R332 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.2■□□□□ 0.98
Nup58Q8R332 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.2■□□□□ 0.98
Nup58Q8R332 Gm40881-201ENSMUST00000223397 166 ntBASIC21.2■□□□□ 0.98
Nup58Q8R332 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nup58Q8R332 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nup58Q8R332 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nup58Q8R332 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Nup58Q8R332 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Nup58Q8R332 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nup58Q8R332 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nup58Q8R332 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.19■□□□□ 0.98
Nup58Q8R332 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Nup58Q8R332 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Nup58Q8R332 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nup58Q8R332 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nup58Q8R332 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.18■□□□□ 0.98
Nup58Q8R332 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Nup58Q8R332 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nup58Q8R332 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nup58Q8R332 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Nup58Q8R332 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Nup58Q8R332 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nup58Q8R332 Gm7143-201ENSMUST00000222811 859 ntBASIC21.17■□□□□ 0.98
Nup58Q8R332 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Nup58Q8R332 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nup58Q8R332 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nup58Q8R332 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Nup58Q8R332 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nup58Q8R332 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nup58Q8R332 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Nup58Q8R332 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nup58Q8R332 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms