Protein–RNA interactions for Protein: Q8R1J1

Tm6sf2, Transmembrane 6 superfamily member 2, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf2Q8R1J1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Tm6sf2Q8R1J1 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tm6sf2Q8R1J1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tm6sf2Q8R1J1 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tm6sf2Q8R1J1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tm6sf2Q8R1J1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tm6sf2Q8R1J1 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tm6sf2Q8R1J1 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Tm6sf2Q8R1J1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Tm6sf2Q8R1J1 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.72■□□□□ 0.59
Tm6sf2Q8R1J1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Tm6sf2Q8R1J1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tm6sf2Q8R1J1 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tm6sf2Q8R1J1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tm6sf2Q8R1J1 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.72■□□□□ 0.59
Tm6sf2Q8R1J1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tm6sf2Q8R1J1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tm6sf2Q8R1J1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Tm6sf2Q8R1J1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tm6sf2Q8R1J1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tm6sf2Q8R1J1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tm6sf2Q8R1J1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.71■□□□□ 0.59
Tm6sf2Q8R1J1 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tm6sf2Q8R1J1 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.71■□□□□ 0.59
Tm6sf2Q8R1J1 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tm6sf2Q8R1J1 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tm6sf2Q8R1J1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tm6sf2Q8R1J1 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Tm6sf2Q8R1J1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Tm6sf2Q8R1J1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.7■□□□□ 0.58
Tm6sf2Q8R1J1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tm6sf2Q8R1J1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Tm6sf2Q8R1J1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tm6sf2Q8R1J1 Gm43017-201ENSMUST00000198296 752 ntBASIC18.7■□□□□ 0.58
Tm6sf2Q8R1J1 Serp2-204ENSMUST00000228055 705 ntBASIC18.7■□□□□ 0.58
Tm6sf2Q8R1J1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tm6sf2Q8R1J1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.7■□□□□ 0.58
Tm6sf2Q8R1J1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Tm6sf2Q8R1J1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tm6sf2Q8R1J1 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tm6sf2Q8R1J1 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tm6sf2Q8R1J1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Tm6sf2Q8R1J1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.69■□□□□ 0.58
Tm6sf2Q8R1J1 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.69■□□□□ 0.58
Tm6sf2Q8R1J1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Tm6sf2Q8R1J1 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tm6sf2Q8R1J1 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tm6sf2Q8R1J1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tm6sf2Q8R1J1 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.69■□□□□ 0.58
Tm6sf2Q8R1J1 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.69■□□□□ 0.58
Tm6sf2Q8R1J1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tm6sf2Q8R1J1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tm6sf2Q8R1J1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tm6sf2Q8R1J1 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tm6sf2Q8R1J1 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Tm6sf2Q8R1J1 Gm43173-201ENSMUST00000202246 593 ntBASIC18.68■□□□□ 0.58
Tm6sf2Q8R1J1 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tm6sf2Q8R1J1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.68■□□□□ 0.58
Tm6sf2Q8R1J1 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Tm6sf2Q8R1J1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tm6sf2Q8R1J1 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Tm6sf2Q8R1J1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tm6sf2Q8R1J1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tm6sf2Q8R1J1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tm6sf2Q8R1J1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.67■□□□□ 0.58
Tm6sf2Q8R1J1 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tm6sf2Q8R1J1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tm6sf2Q8R1J1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tm6sf2Q8R1J1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tm6sf2Q8R1J1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tm6sf2Q8R1J1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tm6sf2Q8R1J1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tm6sf2Q8R1J1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tm6sf2Q8R1J1 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tm6sf2Q8R1J1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tm6sf2Q8R1J1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tm6sf2Q8R1J1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Tm6sf2Q8R1J1 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tm6sf2Q8R1J1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tm6sf2Q8R1J1 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tm6sf2Q8R1J1 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Tm6sf2Q8R1J1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.66■□□□□ 0.58
Tm6sf2Q8R1J1 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Tm6sf2Q8R1J1 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.66■□□□□ 0.58
Tm6sf2Q8R1J1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tm6sf2Q8R1J1 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.66■□□□□ 0.58
Tm6sf2Q8R1J1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Tm6sf2Q8R1J1 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tm6sf2Q8R1J1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tm6sf2Q8R1J1 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tm6sf2Q8R1J1 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tm6sf2Q8R1J1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.65■□□□□ 0.58
Tm6sf2Q8R1J1 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tm6sf2Q8R1J1 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tm6sf2Q8R1J1 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.65■□□□□ 0.58
Tm6sf2Q8R1J1 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tm6sf2Q8R1J1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tm6sf2Q8R1J1 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.65■□□□□ 0.58
Tm6sf2Q8R1J1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tm6sf2Q8R1J1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms