Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vopp1Q8R1C3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vopp1Q8R1C3 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vopp1Q8R1C3 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vopp1Q8R1C3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
Vopp1Q8R1C3 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vopp1Q8R1C3 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vopp1Q8R1C3 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vopp1Q8R1C3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vopp1Q8R1C3 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vopp1Q8R1C3 Gm29257-201ENSMUST00000186115 639 ntBASIC21.51■■□□□ 1.03
Vopp1Q8R1C3 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Vopp1Q8R1C3 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Vopp1Q8R1C3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vopp1Q8R1C3 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Vopp1Q8R1C3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vopp1Q8R1C3 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.5■■□□□ 1.03
Vopp1Q8R1C3 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vopp1Q8R1C3 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Vopp1Q8R1C3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.5■■□□□ 1.03
Vopp1Q8R1C3 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vopp1Q8R1C3 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Vopp1Q8R1C3 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.5■■□□□ 1.03
Vopp1Q8R1C3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vopp1Q8R1C3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vopp1Q8R1C3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vopp1Q8R1C3 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Vopp1Q8R1C3 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
Vopp1Q8R1C3 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Vopp1Q8R1C3 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.49■■□□□ 1.03
Vopp1Q8R1C3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vopp1Q8R1C3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vopp1Q8R1C3 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vopp1Q8R1C3 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vopp1Q8R1C3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Vopp1Q8R1C3 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vopp1Q8R1C3 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vopp1Q8R1C3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
Vopp1Q8R1C3 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.47■■□□□ 1.03
Vopp1Q8R1C3 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.47■■□□□ 1.03
Vopp1Q8R1C3 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC21.47■■□□□ 1.03
Vopp1Q8R1C3 Gm37179-201ENSMUST00000194862 823 ntBASIC21.47■■□□□ 1.03
Vopp1Q8R1C3 Gm42569-201ENSMUST00000200539 472 ntBASIC21.47■■□□□ 1.03
Vopp1Q8R1C3 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Vopp1Q8R1C3 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vopp1Q8R1C3 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vopp1Q8R1C3 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vopp1Q8R1C3 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vopp1Q8R1C3 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vopp1Q8R1C3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vopp1Q8R1C3 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Vopp1Q8R1C3 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.46■■□□□ 1.03
Vopp1Q8R1C3 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.46■■□□□ 1.03
Vopp1Q8R1C3 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.46■■□□□ 1.03
Vopp1Q8R1C3 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vopp1Q8R1C3 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Vopp1Q8R1C3 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.46■■□□□ 1.03
Vopp1Q8R1C3 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Vopp1Q8R1C3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.45■■□□□ 1.02
Vopp1Q8R1C3 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.45■■□□□ 1.02
Vopp1Q8R1C3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vopp1Q8R1C3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vopp1Q8R1C3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vopp1Q8R1C3 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Vopp1Q8R1C3 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Vopp1Q8R1C3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Vopp1Q8R1C3 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC21.44■■□□□ 1.02
Vopp1Q8R1C3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.44■■□□□ 1.02
Vopp1Q8R1C3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vopp1Q8R1C3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
Vopp1Q8R1C3 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Vopp1Q8R1C3 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Vopp1Q8R1C3 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Vopp1Q8R1C3 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.43■■□□□ 1.02
Vopp1Q8R1C3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Vopp1Q8R1C3 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.43■■□□□ 1.02
Vopp1Q8R1C3 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Vopp1Q8R1C3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Vopp1Q8R1C3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Vopp1Q8R1C3 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Vopp1Q8R1C3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Vopp1Q8R1C3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Vopp1Q8R1C3 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Vopp1Q8R1C3 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Vopp1Q8R1C3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Vopp1Q8R1C3 AV356131-201ENSMUST00000206201 750 ntBASIC21.42■■□□□ 1.02
Vopp1Q8R1C3 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Vopp1Q8R1C3 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC21.42■■□□□ 1.02
Vopp1Q8R1C3 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vopp1Q8R1C3 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.41■■□□□ 1.02
Vopp1Q8R1C3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Vopp1Q8R1C3 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vopp1Q8R1C3 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC21.4■■□□□ 1.02
Vopp1Q8R1C3 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vopp1Q8R1C3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Vopp1Q8R1C3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Vopp1Q8R1C3 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.4■■□□□ 1.02
Vopp1Q8R1C3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vopp1Q8R1C3 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vopp1Q8R1C3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms