Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Ddx54Q8K4L0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC26.43■■□□□ 1.82
Ddx54Q8K4L0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Ddx54Q8K4L0 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC26.43■■□□□ 1.82
Ddx54Q8K4L0 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Ddx54Q8K4L0 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Ddx54Q8K4L0 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Ddx54Q8K4L0 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ddx54Q8K4L0 Gm7290-201ENSMUST00000104990 617 ntBASIC26.41■■□□□ 1.82
Ddx54Q8K4L0 Gm12918-201ENSMUST00000120234 636 ntBASIC26.41■■□□□ 1.82
Ddx54Q8K4L0 Gm15710-201ENSMUST00000121821 636 ntBASIC26.41■■□□□ 1.82
Ddx54Q8K4L0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC26.41■■□□□ 1.82
Ddx54Q8K4L0 Gm5075-201ENSMUST00000196916 622 ntBASIC26.41■■□□□ 1.82
Ddx54Q8K4L0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ddx54Q8K4L0 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC26.41■■□□□ 1.82
Ddx54Q8K4L0 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC26.41■■□□□ 1.82
Ddx54Q8K4L0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ddx54Q8K4L0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ddx54Q8K4L0 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ddx54Q8K4L0 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ddx54Q8K4L0 AC164883.3-201ENSMUST00000227396 1774 ntBASIC26.41■■□□□ 1.82
Ddx54Q8K4L0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Ddx54Q8K4L0 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC26.4■■□□□ 1.82
Ddx54Q8K4L0 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Ddx54Q8K4L0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Ddx54Q8K4L0 Gm10571-201ENSMUST00000097869 1638 ntBASIC26.39■■□□□ 1.82
Ddx54Q8K4L0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Ddx54Q8K4L0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Ddx54Q8K4L0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC26.39■■□□□ 1.82
Ddx54Q8K4L0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Ddx54Q8K4L0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Ddx54Q8K4L0 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Ddx54Q8K4L0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ddx54Q8K4L0 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ddx54Q8K4L0 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC26.38■■□□□ 1.81
Ddx54Q8K4L0 Mir6236-201ENSMUST00000184437 123 ntBASIC26.38■■□□□ 1.81
Ddx54Q8K4L0 Gm29241-201ENSMUST00000189260 1096 ntBASIC26.38■■□□□ 1.81
Ddx54Q8K4L0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Ddx54Q8K4L0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC26.38■■□□□ 1.81
Ddx54Q8K4L0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ddx54Q8K4L0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ddx54Q8K4L0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ddx54Q8K4L0 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC26.38■■□□□ 1.81
Ddx54Q8K4L0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC26.37■■□□□ 1.81
Ddx54Q8K4L0 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC26.37■■□□□ 1.81
Ddx54Q8K4L0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Ddx54Q8K4L0 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Ddx54Q8K4L0 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Ddx54Q8K4L0 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Ddx54Q8K4L0 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ddx54Q8K4L0 Gm42418-201ENSMUST00000182010 1831 ntBASIC26.36■■□□□ 1.81
Ddx54Q8K4L0 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Ddx54Q8K4L0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ddx54Q8K4L0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC26.36■■□□□ 1.81
Ddx54Q8K4L0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ddx54Q8K4L0 Gm13836-201ENSMUST00000121159 501 ntBASIC26.35■■□□□ 1.81
Ddx54Q8K4L0 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
Ddx54Q8K4L0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ddx54Q8K4L0 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC26.35■■□□□ 1.81
Ddx54Q8K4L0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ddx54Q8K4L0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
Ddx54Q8K4L0 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ddx54Q8K4L0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ddx54Q8K4L0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC26.34■■□□□ 1.81
Ddx54Q8K4L0 Trmt13-210ENSMUST00000198454 880 ntBASIC26.34■■□□□ 1.81
Ddx54Q8K4L0 Gm44878-201ENSMUST00000205812 1295 ntBASIC26.34■■□□□ 1.81
Ddx54Q8K4L0 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
Ddx54Q8K4L0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Ddx54Q8K4L0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Ddx54Q8K4L0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ddx54Q8K4L0 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ddx54Q8K4L0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
Ddx54Q8K4L0 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
Ddx54Q8K4L0 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ddx54Q8K4L0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ddx54Q8K4L0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ddx54Q8K4L0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Ddx54Q8K4L0 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Ddx54Q8K4L0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ddx54Q8K4L0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ddx54Q8K4L0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ddx54Q8K4L0 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Ddx54Q8K4L0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC26.32■■□□□ 1.8
Ddx54Q8K4L0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ddx54Q8K4L0 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ddx54Q8K4L0 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ddx54Q8K4L0 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Ddx54Q8K4L0 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ddx54Q8K4L0 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ddx54Q8K4L0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ddx54Q8K4L0 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ddx54Q8K4L0 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ddx54Q8K4L0 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ddx54Q8K4L0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Ddx54Q8K4L0 Gm6420-201ENSMUST00000193885 723 ntBASIC26.3■■□□□ 1.8
Ddx54Q8K4L0 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ddx54Q8K4L0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ddx54Q8K4L0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ddx54Q8K4L0 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ddx54Q8K4L0 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms