Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Ddx54Q8K4L0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC26.43■■□□□ 1.82
Ddx54Q8K4L0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Ddx54Q8K4L0 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC26.43■■□□□ 1.82
Ddx54Q8K4L0 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Ddx54Q8K4L0 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Ddx54Q8K4L0 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Ddx54Q8K4L0 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ddx54Q8K4L0 Gm7290-201ENSMUST00000104990 617 ntBASIC26.41■■□□□ 1.82
Ddx54Q8K4L0 Gm12918-201ENSMUST00000120234 636 ntBASIC26.41■■□□□ 1.82
Ddx54Q8K4L0 Gm15710-201ENSMUST00000121821 636 ntBASIC26.41■■□□□ 1.82
Ddx54Q8K4L0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC26.41■■□□□ 1.82
Ddx54Q8K4L0 Gm5075-201ENSMUST00000196916 622 ntBASIC26.41■■□□□ 1.82
Ddx54Q8K4L0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ddx54Q8K4L0 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC26.41■■□□□ 1.82
Ddx54Q8K4L0 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC26.41■■□□□ 1.82
Ddx54Q8K4L0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ddx54Q8K4L0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ddx54Q8K4L0 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ddx54Q8K4L0 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ddx54Q8K4L0 AC164883.3-201ENSMUST00000227396 1774 ntBASIC26.41■■□□□ 1.82
Ddx54Q8K4L0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Ddx54Q8K4L0 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC26.4■■□□□ 1.82
Ddx54Q8K4L0 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Ddx54Q8K4L0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Ddx54Q8K4L0 Gm10571-201ENSMUST00000097869 1638 ntBASIC26.39■■□□□ 1.82
Ddx54Q8K4L0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Ddx54Q8K4L0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Ddx54Q8K4L0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC26.39■■□□□ 1.82
Ddx54Q8K4L0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Ddx54Q8K4L0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Ddx54Q8K4L0 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Ddx54Q8K4L0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ddx54Q8K4L0 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ddx54Q8K4L0 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC26.38■■□□□ 1.81
Ddx54Q8K4L0 Mir6236-201ENSMUST00000184437 123 ntBASIC26.38■■□□□ 1.81
Ddx54Q8K4L0 Gm29241-201ENSMUST00000189260 1096 ntBASIC26.38■■□□□ 1.81
Ddx54Q8K4L0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Ddx54Q8K4L0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC26.38■■□□□ 1.81
Ddx54Q8K4L0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ddx54Q8K4L0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ddx54Q8K4L0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ddx54Q8K4L0 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC26.38■■□□□ 1.81
Ddx54Q8K4L0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC26.37■■□□□ 1.81
Ddx54Q8K4L0 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC26.37■■□□□ 1.81
Ddx54Q8K4L0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Ddx54Q8K4L0 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Ddx54Q8K4L0 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Ddx54Q8K4L0 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Ddx54Q8K4L0 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ddx54Q8K4L0 Gm42418-201ENSMUST00000182010 1831 ntBASIC26.36■■□□□ 1.81
Ddx54Q8K4L0 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Ddx54Q8K4L0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ddx54Q8K4L0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC26.36■■□□□ 1.81
Ddx54Q8K4L0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ddx54Q8K4L0 Gm13836-201ENSMUST00000121159 501 ntBASIC26.35■■□□□ 1.81
Ddx54Q8K4L0 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
Ddx54Q8K4L0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ddx54Q8K4L0 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC26.35■■□□□ 1.81
Ddx54Q8K4L0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ddx54Q8K4L0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
Ddx54Q8K4L0 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ddx54Q8K4L0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ddx54Q8K4L0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC26.34■■□□□ 1.81
Ddx54Q8K4L0 Trmt13-210ENSMUST00000198454 880 ntBASIC26.34■■□□□ 1.81
Ddx54Q8K4L0 Gm44878-201ENSMUST00000205812 1295 ntBASIC26.34■■□□□ 1.81
Ddx54Q8K4L0 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
Ddx54Q8K4L0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Ddx54Q8K4L0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Ddx54Q8K4L0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ddx54Q8K4L0 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ddx54Q8K4L0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
Ddx54Q8K4L0 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
Ddx54Q8K4L0 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ddx54Q8K4L0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ddx54Q8K4L0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ddx54Q8K4L0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Ddx54Q8K4L0 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Ddx54Q8K4L0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ddx54Q8K4L0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ddx54Q8K4L0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ddx54Q8K4L0 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Ddx54Q8K4L0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC26.32■■□□□ 1.8
Ddx54Q8K4L0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ddx54Q8K4L0 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ddx54Q8K4L0 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ddx54Q8K4L0 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Ddx54Q8K4L0 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ddx54Q8K4L0 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ddx54Q8K4L0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ddx54Q8K4L0 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ddx54Q8K4L0 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ddx54Q8K4L0 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ddx54Q8K4L0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Ddx54Q8K4L0 Gm6420-201ENSMUST00000193885 723 ntBASIC26.3■■□□□ 1.8
Ddx54Q8K4L0 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ddx54Q8K4L0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ddx54Q8K4L0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ddx54Q8K4L0 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ddx54Q8K4L0 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms