Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfwd3Q8CIK8 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Rfwd3Q8CIK8 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rfwd3Q8CIK8 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Rfwd3Q8CIK8 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfwd3Q8CIK8 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfwd3Q8CIK8 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfwd3Q8CIK8 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.65■□□□□ 0.58
Rfwd3Q8CIK8 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfwd3Q8CIK8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfwd3Q8CIK8 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfwd3Q8CIK8 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfwd3Q8CIK8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
Rfwd3Q8CIK8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.64■□□□□ 0.57
Rfwd3Q8CIK8 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfwd3Q8CIK8 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.64■□□□□ 0.57
Rfwd3Q8CIK8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfwd3Q8CIK8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Rfwd3Q8CIK8 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfwd3Q8CIK8 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfwd3Q8CIK8 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfwd3Q8CIK8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfwd3Q8CIK8 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfwd3Q8CIK8 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Rfwd3Q8CIK8 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfwd3Q8CIK8 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfwd3Q8CIK8 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.62■□□□□ 0.57
Rfwd3Q8CIK8 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rfwd3Q8CIK8 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfwd3Q8CIK8 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfwd3Q8CIK8 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfwd3Q8CIK8 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfwd3Q8CIK8 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfwd3Q8CIK8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfwd3Q8CIK8 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfwd3Q8CIK8 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Rfwd3Q8CIK8 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rfwd3Q8CIK8 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfwd3Q8CIK8 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfwd3Q8CIK8 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rfwd3Q8CIK8 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfwd3Q8CIK8 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Rfwd3Q8CIK8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfwd3Q8CIK8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfwd3Q8CIK8 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfwd3Q8CIK8 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rfwd3Q8CIK8 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Rfwd3Q8CIK8 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfwd3Q8CIK8 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rfwd3Q8CIK8 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rfwd3Q8CIK8 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Rfwd3Q8CIK8 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Rfwd3Q8CIK8 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rfwd3Q8CIK8 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rfwd3Q8CIK8 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfwd3Q8CIK8 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfwd3Q8CIK8 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfwd3Q8CIK8 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.59■□□□□ 0.57
Rfwd3Q8CIK8 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfwd3Q8CIK8 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Rfwd3Q8CIK8 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfwd3Q8CIK8 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfwd3Q8CIK8 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rfwd3Q8CIK8 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rfwd3Q8CIK8 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfwd3Q8CIK8 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Rfwd3Q8CIK8 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rfwd3Q8CIK8 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfwd3Q8CIK8 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.58■□□□□ 0.57
Rfwd3Q8CIK8 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Rfwd3Q8CIK8 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Rfwd3Q8CIK8 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
Rfwd3Q8CIK8 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rfwd3Q8CIK8 Mir6236-201ENSMUST00000184437 123 ntBASIC18.58■□□□□ 0.56
Rfwd3Q8CIK8 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.58■□□□□ 0.56
Rfwd3Q8CIK8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rfwd3Q8CIK8 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rfwd3Q8CIK8 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rfwd3Q8CIK8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.58■□□□□ 0.56
Rfwd3Q8CIK8 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Rfwd3Q8CIK8 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Rfwd3Q8CIK8 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfwd3Q8CIK8 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
Rfwd3Q8CIK8 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rfwd3Q8CIK8 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfwd3Q8CIK8 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rfwd3Q8CIK8 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfwd3Q8CIK8 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfwd3Q8CIK8 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfwd3Q8CIK8 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rfwd3Q8CIK8 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfwd3Q8CIK8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfwd3Q8CIK8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfwd3Q8CIK8 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rfwd3Q8CIK8 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfwd3Q8CIK8 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfwd3Q8CIK8 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfwd3Q8CIK8 Gm12821-201ENSMUST00000120022 600 ntBASIC18.56■□□□□ 0.56
Rfwd3Q8CIK8 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rfwd3Q8CIK8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms