Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps50Q8CI71 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Vps50Q8CI71 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Vps50Q8CI71 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.42■□□□□ 0.7
Vps50Q8CI71 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.42■□□□□ 0.7
Vps50Q8CI71 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps50Q8CI71 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.42■□□□□ 0.7
Vps50Q8CI71 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps50Q8CI71 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps50Q8CI71 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps50Q8CI71 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Vps50Q8CI71 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps50Q8CI71 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps50Q8CI71 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps50Q8CI71 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps50Q8CI71 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps50Q8CI71 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vps50Q8CI71 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.41■□□□□ 0.7
Vps50Q8CI71 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps50Q8CI71 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps50Q8CI71 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Vps50Q8CI71 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps50Q8CI71 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps50Q8CI71 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps50Q8CI71 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Vps50Q8CI71 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps50Q8CI71 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.4■□□□□ 0.7
Vps50Q8CI71 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Vps50Q8CI71 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.4■□□□□ 0.7
Vps50Q8CI71 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Vps50Q8CI71 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.4■□□□□ 0.7
Vps50Q8CI71 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.4■□□□□ 0.7
Vps50Q8CI71 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.4■□□□□ 0.7
Vps50Q8CI71 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps50Q8CI71 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
Vps50Q8CI71 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Vps50Q8CI71 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps50Q8CI71 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps50Q8CI71 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.4■□□□□ 0.7
Vps50Q8CI71 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.4■□□□□ 0.7
Vps50Q8CI71 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Vps50Q8CI71 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps50Q8CI71 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.39■□□□□ 0.69
Vps50Q8CI71 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Vps50Q8CI71 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps50Q8CI71 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps50Q8CI71 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps50Q8CI71 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Vps50Q8CI71 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps50Q8CI71 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps50Q8CI71 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps50Q8CI71 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps50Q8CI71 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Vps50Q8CI71 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps50Q8CI71 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.38■□□□□ 0.69
Vps50Q8CI71 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps50Q8CI71 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.38■□□□□ 0.69
Vps50Q8CI71 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Vps50Q8CI71 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps50Q8CI71 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps50Q8CI71 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps50Q8CI71 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps50Q8CI71 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps50Q8CI71 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps50Q8CI71 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps50Q8CI71 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps50Q8CI71 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps50Q8CI71 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps50Q8CI71 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Vps50Q8CI71 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Vps50Q8CI71 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps50Q8CI71 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.37■□□□□ 0.69
Vps50Q8CI71 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Vps50Q8CI71 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
Vps50Q8CI71 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Vps50Q8CI71 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps50Q8CI71 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps50Q8CI71 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Vps50Q8CI71 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Vps50Q8CI71 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vps50Q8CI71 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.36■□□□□ 0.69
Vps50Q8CI71 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps50Q8CI71 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Vps50Q8CI71 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.36■□□□□ 0.69
Vps50Q8CI71 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps50Q8CI71 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps50Q8CI71 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps50Q8CI71 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Vps50Q8CI71 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Vps50Q8CI71 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Vps50Q8CI71 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps50Q8CI71 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.35■□□□□ 0.69
Vps50Q8CI71 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.35■□□□□ 0.69
Vps50Q8CI71 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps50Q8CI71 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps50Q8CI71 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps50Q8CI71 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Vps50Q8CI71 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps50Q8CI71 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.34■□□□□ 0.69
Vps50Q8CI71 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms