Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Zc3h3Q8CHP0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Zc3h3Q8CHP0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Zc3h3Q8CHP0 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Zc3h3Q8CHP0 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.73■□□□□ 0.75
Zc3h3Q8CHP0 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Zc3h3Q8CHP0 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Zc3h3Q8CHP0 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Zc3h3Q8CHP0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Zc3h3Q8CHP0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Zc3h3Q8CHP0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Zc3h3Q8CHP0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Zc3h3Q8CHP0 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Zc3h3Q8CHP0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Zc3h3Q8CHP0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Zc3h3Q8CHP0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Zc3h3Q8CHP0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.72■□□□□ 0.75
Zc3h3Q8CHP0 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Zc3h3Q8CHP0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Zc3h3Q8CHP0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Zc3h3Q8CHP0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Zc3h3Q8CHP0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Zc3h3Q8CHP0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Zc3h3Q8CHP0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.71■□□□□ 0.75
Zc3h3Q8CHP0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Zc3h3Q8CHP0 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Zc3h3Q8CHP0 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Zc3h3Q8CHP0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.71■□□□□ 0.75
Zc3h3Q8CHP0 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Zc3h3Q8CHP0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.71■□□□□ 0.75
Zc3h3Q8CHP0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Zc3h3Q8CHP0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Zc3h3Q8CHP0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Zc3h3Q8CHP0 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.7■□□□□ 0.74
Zc3h3Q8CHP0 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Zc3h3Q8CHP0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Zc3h3Q8CHP0 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.7■□□□□ 0.74
Zc3h3Q8CHP0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Zc3h3Q8CHP0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Zc3h3Q8CHP0 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Zc3h3Q8CHP0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Zc3h3Q8CHP0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Zc3h3Q8CHP0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Zc3h3Q8CHP0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.69■□□□□ 0.74
Zc3h3Q8CHP0 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Zc3h3Q8CHP0 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Zc3h3Q8CHP0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Zc3h3Q8CHP0 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Zc3h3Q8CHP0 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Zc3h3Q8CHP0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Zc3h3Q8CHP0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Zc3h3Q8CHP0 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Zc3h3Q8CHP0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Zc3h3Q8CHP0 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Zc3h3Q8CHP0 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.68■□□□□ 0.74
Zc3h3Q8CHP0 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Zc3h3Q8CHP0 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Zc3h3Q8CHP0 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.68■□□□□ 0.74
Zc3h3Q8CHP0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.68■□□□□ 0.74
Zc3h3Q8CHP0 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.68■□□□□ 0.74
Zc3h3Q8CHP0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.68■□□□□ 0.74
Zc3h3Q8CHP0 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Zc3h3Q8CHP0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Zc3h3Q8CHP0 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Zc3h3Q8CHP0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Zc3h3Q8CHP0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Zc3h3Q8CHP0 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Zc3h3Q8CHP0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Zc3h3Q8CHP0 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.67■□□□□ 0.74
Zc3h3Q8CHP0 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.67■□□□□ 0.74
Zc3h3Q8CHP0 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Zc3h3Q8CHP0 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Zc3h3Q8CHP0 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Zc3h3Q8CHP0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.67■□□□□ 0.74
Zc3h3Q8CHP0 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Zc3h3Q8CHP0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Zc3h3Q8CHP0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Zc3h3Q8CHP0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Zc3h3Q8CHP0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
Zc3h3Q8CHP0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Zc3h3Q8CHP0 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.66■□□□□ 0.74
Zc3h3Q8CHP0 Mir6236-201ENSMUST00000184437 123 ntBASIC19.66■□□□□ 0.74
Zc3h3Q8CHP0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Zc3h3Q8CHP0 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Zc3h3Q8CHP0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Zc3h3Q8CHP0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Zc3h3Q8CHP0 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Zc3h3Q8CHP0 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.65■□□□□ 0.74
Zc3h3Q8CHP0 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Zc3h3Q8CHP0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Zc3h3Q8CHP0 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Zc3h3Q8CHP0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Zc3h3Q8CHP0 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Zc3h3Q8CHP0 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.65■□□□□ 0.74
Zc3h3Q8CHP0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Zc3h3Q8CHP0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Zc3h3Q8CHP0 Gm6420-201ENSMUST00000193885 723 ntBASIC19.65■□□□□ 0.74
Zc3h3Q8CHP0 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Zc3h3Q8CHP0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Zc3h3Q8CHP0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms