Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp28Q8CGV8 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp28Q8CGV8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp28Q8CGV8 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp28Q8CGV8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp28Q8CGV8 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp28Q8CGV8 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp28Q8CGV8 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.92■□□□□ 0.3
Mmp28Q8CGV8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp28Q8CGV8 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Mmp28Q8CGV8 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.92■□□□□ 0.3
Mmp28Q8CGV8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp28Q8CGV8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp28Q8CGV8 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Mmp28Q8CGV8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp28Q8CGV8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp28Q8CGV8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.92■□□□□ 0.3
Mmp28Q8CGV8 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC16.92■□□□□ 0.3
Mmp28Q8CGV8 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp28Q8CGV8 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp28Q8CGV8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp28Q8CGV8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Mmp28Q8CGV8 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp28Q8CGV8 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Mmp28Q8CGV8 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp28Q8CGV8 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp28Q8CGV8 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp28Q8CGV8 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16.92■□□□□ 0.3
Mmp28Q8CGV8 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp28Q8CGV8 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp28Q8CGV8 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp28Q8CGV8 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mmp28Q8CGV8 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mmp28Q8CGV8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mmp28Q8CGV8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mmp28Q8CGV8 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.91■□□□□ 0.3
Mmp28Q8CGV8 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Mmp28Q8CGV8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Mmp28Q8CGV8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.91■□□□□ 0.3
Mmp28Q8CGV8 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.91■□□□□ 0.3
Mmp28Q8CGV8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mmp28Q8CGV8 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mmp28Q8CGV8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mmp28Q8CGV8 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.91■□□□□ 0.3
Mmp28Q8CGV8 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mmp28Q8CGV8 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mmp28Q8CGV8 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mmp28Q8CGV8 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.9■□□□□ 0.3
Mmp28Q8CGV8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Mmp28Q8CGV8 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Mmp28Q8CGV8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Mmp28Q8CGV8 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mmp28Q8CGV8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Mmp28Q8CGV8 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Mmp28Q8CGV8 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Mmp28Q8CGV8 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mmp28Q8CGV8 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mmp28Q8CGV8 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mmp28Q8CGV8 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mmp28Q8CGV8 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mmp28Q8CGV8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Mmp28Q8CGV8 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.89■□□□□ 0.3
Mmp28Q8CGV8 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp28Q8CGV8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp28Q8CGV8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp28Q8CGV8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC16.89■□□□□ 0.29
Mmp28Q8CGV8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp28Q8CGV8 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.89■□□□□ 0.29
Mmp28Q8CGV8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp28Q8CGV8 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Mmp28Q8CGV8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mmp28Q8CGV8 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mmp28Q8CGV8 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.88■□□□□ 0.29
Mmp28Q8CGV8 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mmp28Q8CGV8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mmp28Q8CGV8 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Mmp28Q8CGV8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Mmp28Q8CGV8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.88■□□□□ 0.29
Mmp28Q8CGV8 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.88■□□□□ 0.29
Mmp28Q8CGV8 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mmp28Q8CGV8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mmp28Q8CGV8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mmp28Q8CGV8 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Mmp28Q8CGV8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mmp28Q8CGV8 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Mmp28Q8CGV8 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mmp28Q8CGV8 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mmp28Q8CGV8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mmp28Q8CGV8 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Mmp28Q8CGV8 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Mmp28Q8CGV8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mmp28Q8CGV8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mmp28Q8CGV8 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mmp28Q8CGV8 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Mmp28Q8CGV8 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mmp28Q8CGV8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mmp28Q8CGV8 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mmp28Q8CGV8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mmp28Q8CGV8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Mmp28Q8CGV8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 138.5 ms