Protein–RNA interactions for Protein: Q8CE50

Snx30, Sorting nexin-30, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx30Q8CE50 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Snx30Q8CE50 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Snx30Q8CE50 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Snx30Q8CE50 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Snx30Q8CE50 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Snx30Q8CE50 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Snx30Q8CE50 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Snx30Q8CE50 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.47■□□□□ 0.87
Snx30Q8CE50 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
Snx30Q8CE50 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Snx30Q8CE50 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Snx30Q8CE50 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Snx30Q8CE50 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Snx30Q8CE50 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Snx30Q8CE50 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Snx30Q8CE50 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Snx30Q8CE50 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Snx30Q8CE50 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Snx30Q8CE50 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Snx30Q8CE50 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Snx30Q8CE50 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Snx30Q8CE50 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Snx30Q8CE50 Gm9847-201ENSMUST00000052528 599 ntBASIC20.46■□□□□ 0.87
Snx30Q8CE50 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Snx30Q8CE50 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Snx30Q8CE50 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.46■□□□□ 0.87
Snx30Q8CE50 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Snx30Q8CE50 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Snx30Q8CE50 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Snx30Q8CE50 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Snx30Q8CE50 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Snx30Q8CE50 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Snx30Q8CE50 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Snx30Q8CE50 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Snx30Q8CE50 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Snx30Q8CE50 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Snx30Q8CE50 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Snx30Q8CE50 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Snx30Q8CE50 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Snx30Q8CE50 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Snx30Q8CE50 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Snx30Q8CE50 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Snx30Q8CE50 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Snx30Q8CE50 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Snx30Q8CE50 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Snx30Q8CE50 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Snx30Q8CE50 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Snx30Q8CE50 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Snx30Q8CE50 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Snx30Q8CE50 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.43■□□□□ 0.86
Snx30Q8CE50 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Snx30Q8CE50 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Snx30Q8CE50 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Snx30Q8CE50 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Snx30Q8CE50 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Snx30Q8CE50 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Snx30Q8CE50 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Snx30Q8CE50 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Snx30Q8CE50 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Snx30Q8CE50 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.42■□□□□ 0.86
Snx30Q8CE50 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.42■□□□□ 0.86
Snx30Q8CE50 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Snx30Q8CE50 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Snx30Q8CE50 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Snx30Q8CE50 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Snx30Q8CE50 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Snx30Q8CE50 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Snx30Q8CE50 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Snx30Q8CE50 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Snx30Q8CE50 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
Snx30Q8CE50 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Snx30Q8CE50 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.41■□□□□ 0.86
Snx30Q8CE50 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Snx30Q8CE50 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Snx30Q8CE50 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Snx30Q8CE50 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Snx30Q8CE50 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Snx30Q8CE50 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Snx30Q8CE50 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Snx30Q8CE50 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Snx30Q8CE50 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Snx30Q8CE50 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Snx30Q8CE50 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Snx30Q8CE50 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Snx30Q8CE50 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Snx30Q8CE50 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.39■□□□□ 0.86
Snx30Q8CE50 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Snx30Q8CE50 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Snx30Q8CE50 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Snx30Q8CE50 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Snx30Q8CE50 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Snx30Q8CE50 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Snx30Q8CE50 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Snx30Q8CE50 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Snx30Q8CE50 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Snx30Q8CE50 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Snx30Q8CE50 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
Snx30Q8CE50 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.38■□□□□ 0.85
Snx30Q8CE50 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.38■□□□□ 0.85
Snx30Q8CE50 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms