Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SynpoQ8CC35 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SynpoQ8CC35 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SynpoQ8CC35 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SynpoQ8CC35 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SynpoQ8CC35 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.15■□□□□ 0.66
SynpoQ8CC35 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.15■□□□□ 0.66
SynpoQ8CC35 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SynpoQ8CC35 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SynpoQ8CC35 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SynpoQ8CC35 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SynpoQ8CC35 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SynpoQ8CC35 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.66
SynpoQ8CC35 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
SynpoQ8CC35 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SynpoQ8CC35 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SynpoQ8CC35 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SynpoQ8CC35 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SynpoQ8CC35 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SynpoQ8CC35 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SynpoQ8CC35 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SynpoQ8CC35 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SynpoQ8CC35 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SynpoQ8CC35 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
SynpoQ8CC35 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SynpoQ8CC35 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SynpoQ8CC35 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SynpoQ8CC35 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SynpoQ8CC35 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SynpoQ8CC35 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SynpoQ8CC35 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SynpoQ8CC35 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SynpoQ8CC35 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.12■□□□□ 0.65
SynpoQ8CC35 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SynpoQ8CC35 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SynpoQ8CC35 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SynpoQ8CC35 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SynpoQ8CC35 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SynpoQ8CC35 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SynpoQ8CC35 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SynpoQ8CC35 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SynpoQ8CC35 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SynpoQ8CC35 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SynpoQ8CC35 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SynpoQ8CC35 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SynpoQ8CC35 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SynpoQ8CC35 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SynpoQ8CC35 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SynpoQ8CC35 Gm7143-201ENSMUST00000222811 859 ntBASIC19.11■□□□□ 0.65
SynpoQ8CC35 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.11■□□□□ 0.65
SynpoQ8CC35 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.11■□□□□ 0.65
SynpoQ8CC35 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SynpoQ8CC35 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SynpoQ8CC35 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SynpoQ8CC35 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SynpoQ8CC35 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SynpoQ8CC35 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SynpoQ8CC35 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SynpoQ8CC35 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.1■□□□□ 0.65
SynpoQ8CC35 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SynpoQ8CC35 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
SynpoQ8CC35 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SynpoQ8CC35 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SynpoQ8CC35 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SynpoQ8CC35 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SynpoQ8CC35 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SynpoQ8CC35 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.09■□□□□ 0.65
SynpoQ8CC35 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.09■□□□□ 0.65
SynpoQ8CC35 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.09■□□□□ 0.65
SynpoQ8CC35 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SynpoQ8CC35 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SynpoQ8CC35 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
SynpoQ8CC35 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SynpoQ8CC35 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SynpoQ8CC35 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SynpoQ8CC35 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SynpoQ8CC35 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SynpoQ8CC35 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SynpoQ8CC35 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SynpoQ8CC35 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SynpoQ8CC35 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.08■□□□□ 0.65
SynpoQ8CC35 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SynpoQ8CC35 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.08■□□□□ 0.64
SynpoQ8CC35 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
SynpoQ8CC35 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
SynpoQ8CC35 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SynpoQ8CC35 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SynpoQ8CC35 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SynpoQ8CC35 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SynpoQ8CC35 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SynpoQ8CC35 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SynpoQ8CC35 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SynpoQ8CC35 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SynpoQ8CC35 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SynpoQ8CC35 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SynpoQ8CC35 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SynpoQ8CC35 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
SynpoQ8CC35 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SynpoQ8CC35 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.07■□□□□ 0.64
SynpoQ8CC35 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms