Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Slc46a2Q8CA03 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Slc46a2Q8CA03 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc46a2Q8CA03 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.13■□□□□ 0.65
Slc46a2Q8CA03 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc46a2Q8CA03 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Slc46a2Q8CA03 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Slc46a2Q8CA03 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Slc46a2Q8CA03 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc46a2Q8CA03 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.13■□□□□ 0.65
Slc46a2Q8CA03 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc46a2Q8CA03 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Slc46a2Q8CA03 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc46a2Q8CA03 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.12■□□□□ 0.65
Slc46a2Q8CA03 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc46a2Q8CA03 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc46a2Q8CA03 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc46a2Q8CA03 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc46a2Q8CA03 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.11■□□□□ 0.65
Slc46a2Q8CA03 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc46a2Q8CA03 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc46a2Q8CA03 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc46a2Q8CA03 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc46a2Q8CA03 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc46a2Q8CA03 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc46a2Q8CA03 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Slc46a2Q8CA03 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc46a2Q8CA03 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Slc46a2Q8CA03 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Slc46a2Q8CA03 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Slc46a2Q8CA03 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc46a2Q8CA03 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc46a2Q8CA03 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc46a2Q8CA03 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc46a2Q8CA03 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc46a2Q8CA03 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Slc46a2Q8CA03 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Slc46a2Q8CA03 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc46a2Q8CA03 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc46a2Q8CA03 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc46a2Q8CA03 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc46a2Q8CA03 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Slc46a2Q8CA03 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Slc46a2Q8CA03 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc46a2Q8CA03 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Slc46a2Q8CA03 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Slc46a2Q8CA03 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc46a2Q8CA03 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Slc46a2Q8CA03 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Slc46a2Q8CA03 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Slc46a2Q8CA03 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Slc46a2Q8CA03 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Slc46a2Q8CA03 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Slc46a2Q8CA03 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Slc46a2Q8CA03 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.08■□□□□ 0.64
Slc46a2Q8CA03 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Slc46a2Q8CA03 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Slc46a2Q8CA03 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.08■□□□□ 0.64
Slc46a2Q8CA03 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slc46a2Q8CA03 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.08■□□□□ 0.64
Slc46a2Q8CA03 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Slc46a2Q8CA03 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slc46a2Q8CA03 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Slc46a2Q8CA03 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Slc46a2Q8CA03 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Slc46a2Q8CA03 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Slc46a2Q8CA03 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Slc46a2Q8CA03 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Slc46a2Q8CA03 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Slc46a2Q8CA03 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc46a2Q8CA03 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc46a2Q8CA03 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc46a2Q8CA03 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
Slc46a2Q8CA03 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc46a2Q8CA03 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Slc46a2Q8CA03 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc46a2Q8CA03 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc46a2Q8CA03 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc46a2Q8CA03 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc46a2Q8CA03 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Slc46a2Q8CA03 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.06■□□□□ 0.64
Slc46a2Q8CA03 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Slc46a2Q8CA03 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc46a2Q8CA03 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc46a2Q8CA03 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc46a2Q8CA03 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc46a2Q8CA03 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc46a2Q8CA03 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Slc46a2Q8CA03 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc46a2Q8CA03 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.05■□□□□ 0.64
Slc46a2Q8CA03 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc46a2Q8CA03 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc46a2Q8CA03 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Slc46a2Q8CA03 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Slc46a2Q8CA03 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc46a2Q8CA03 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc46a2Q8CA03 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.04■□□□□ 0.64
Slc46a2Q8CA03 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Slc46a2Q8CA03 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc46a2Q8CA03 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms