Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Brat1Q8C3R1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Brat1Q8C3R1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Brat1Q8C3R1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
Brat1Q8C3R1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Brat1Q8C3R1 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Brat1Q8C3R1 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Brat1Q8C3R1 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.04■□□□□ 0.96
Brat1Q8C3R1 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Brat1Q8C3R1 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Brat1Q8C3R1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Brat1Q8C3R1 Gm15039-201ENSMUST00000118914 875 ntBASIC21.03■□□□□ 0.96
Brat1Q8C3R1 Gm43173-201ENSMUST00000202246 593 ntBASIC21.03■□□□□ 0.96
Brat1Q8C3R1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.03■□□□□ 0.96
Brat1Q8C3R1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Brat1Q8C3R1 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Brat1Q8C3R1 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Brat1Q8C3R1 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Brat1Q8C3R1 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Brat1Q8C3R1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Brat1Q8C3R1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.02■□□□□ 0.96
Brat1Q8C3R1 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Brat1Q8C3R1 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Brat1Q8C3R1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Brat1Q8C3R1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Brat1Q8C3R1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Brat1Q8C3R1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Brat1Q8C3R1 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Brat1Q8C3R1 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Brat1Q8C3R1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Brat1Q8C3R1 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Brat1Q8C3R1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Brat1Q8C3R1 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.01■□□□□ 0.95
Brat1Q8C3R1 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Brat1Q8C3R1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.01■□□□□ 0.95
Brat1Q8C3R1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Brat1Q8C3R1 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Brat1Q8C3R1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Brat1Q8C3R1 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Brat1Q8C3R1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Brat1Q8C3R1 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.01■□□□□ 0.95
Brat1Q8C3R1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Brat1Q8C3R1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Brat1Q8C3R1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Brat1Q8C3R1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Brat1Q8C3R1 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Brat1Q8C3R1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21■□□□□ 0.95
Brat1Q8C3R1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Brat1Q8C3R1 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Brat1Q8C3R1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.99■□□□□ 0.95
Brat1Q8C3R1 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Brat1Q8C3R1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Brat1Q8C3R1 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.99■□□□□ 0.95
Brat1Q8C3R1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Brat1Q8C3R1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.99■□□□□ 0.95
Brat1Q8C3R1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Brat1Q8C3R1 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Brat1Q8C3R1 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Brat1Q8C3R1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Brat1Q8C3R1 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Brat1Q8C3R1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.98■□□□□ 0.95
Brat1Q8C3R1 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Brat1Q8C3R1 Gm43017-201ENSMUST00000198296 752 ntBASIC20.98■□□□□ 0.95
Brat1Q8C3R1 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Brat1Q8C3R1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.98■□□□□ 0.95
Brat1Q8C3R1 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.98■□□□□ 0.95
Brat1Q8C3R1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Brat1Q8C3R1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Brat1Q8C3R1 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Brat1Q8C3R1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.97■□□□□ 0.95
Brat1Q8C3R1 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Brat1Q8C3R1 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Brat1Q8C3R1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Brat1Q8C3R1 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
Brat1Q8C3R1 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.97■□□□□ 0.95
Brat1Q8C3R1 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Brat1Q8C3R1 Serp2-204ENSMUST00000228055 705 ntBASIC20.97■□□□□ 0.95
Brat1Q8C3R1 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Brat1Q8C3R1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Brat1Q8C3R1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Brat1Q8C3R1 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Brat1Q8C3R1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Brat1Q8C3R1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Brat1Q8C3R1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Brat1Q8C3R1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Brat1Q8C3R1 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Brat1Q8C3R1 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Brat1Q8C3R1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.96■□□□□ 0.95
Brat1Q8C3R1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Brat1Q8C3R1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Brat1Q8C3R1 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Brat1Q8C3R1 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
Brat1Q8C3R1 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.95■□□□□ 0.94
Brat1Q8C3R1 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Brat1Q8C3R1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Brat1Q8C3R1 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Brat1Q8C3R1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Brat1Q8C3R1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Brat1Q8C3R1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Brat1Q8C3R1 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms