Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Trub1Q8C0D0 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trub1Q8C0D0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Trub1Q8C0D0 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trub1Q8C0D0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trub1Q8C0D0 Notumos-201ENSMUST00000151998 2659 ntBASIC20.62■□□□□ 0.89
Trub1Q8C0D0 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trub1Q8C0D0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trub1Q8C0D0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trub1Q8C0D0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trub1Q8C0D0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trub1Q8C0D0 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Trub1Q8C0D0 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trub1Q8C0D0 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.61■□□□□ 0.89
Trub1Q8C0D0 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Trub1Q8C0D0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.61■□□□□ 0.89
Trub1Q8C0D0 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.61■□□□□ 0.89
Trub1Q8C0D0 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.61■□□□□ 0.89
Trub1Q8C0D0 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.61■□□□□ 0.89
Trub1Q8C0D0 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trub1Q8C0D0 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trub1Q8C0D0 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trub1Q8C0D0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Trub1Q8C0D0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Trub1Q8C0D0 Gm12922-201ENSMUST00000120626 809 ntBASIC20.6■□□□□ 0.89
Trub1Q8C0D0 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.6■□□□□ 0.89
Trub1Q8C0D0 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.6■□□□□ 0.89
Trub1Q8C0D0 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trub1Q8C0D0 Golgb1-201ENSMUST00000023534 498 ntBASIC20.6■□□□□ 0.89
Trub1Q8C0D0 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trub1Q8C0D0 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trub1Q8C0D0 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trub1Q8C0D0 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trub1Q8C0D0 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Trub1Q8C0D0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.59■□□□□ 0.89
Trub1Q8C0D0 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trub1Q8C0D0 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trub1Q8C0D0 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Trub1Q8C0D0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trub1Q8C0D0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trub1Q8C0D0 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.58■□□□□ 0.89
Trub1Q8C0D0 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.58■□□□□ 0.89
Trub1Q8C0D0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trub1Q8C0D0 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trub1Q8C0D0 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trub1Q8C0D0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trub1Q8C0D0 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trub1Q8C0D0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trub1Q8C0D0 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trub1Q8C0D0 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trub1Q8C0D0 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trub1Q8C0D0 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trub1Q8C0D0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trub1Q8C0D0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trub1Q8C0D0 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trub1Q8C0D0 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.56■□□□□ 0.88
Trub1Q8C0D0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.56■□□□□ 0.88
Trub1Q8C0D0 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Trub1Q8C0D0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Trub1Q8C0D0 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trub1Q8C0D0 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.55■□□□□ 0.88
Trub1Q8C0D0 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trub1Q8C0D0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trub1Q8C0D0 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trub1Q8C0D0 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trub1Q8C0D0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trub1Q8C0D0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Trub1Q8C0D0 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trub1Q8C0D0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trub1Q8C0D0 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trub1Q8C0D0 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.54■□□□□ 0.88
Trub1Q8C0D0 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trub1Q8C0D0 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.54■□□□□ 0.88
Trub1Q8C0D0 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trub1Q8C0D0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.53■□□□□ 0.88
Trub1Q8C0D0 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.53■□□□□ 0.88
Trub1Q8C0D0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trub1Q8C0D0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trub1Q8C0D0 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Trub1Q8C0D0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trub1Q8C0D0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trub1Q8C0D0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trub1Q8C0D0 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Trub1Q8C0D0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trub1Q8C0D0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trub1Q8C0D0 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Trub1Q8C0D0 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trub1Q8C0D0 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trub1Q8C0D0 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trub1Q8C0D0 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trub1Q8C0D0 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.52■□□□□ 0.87
Trub1Q8C0D0 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trub1Q8C0D0 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trub1Q8C0D0 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.51■□□□□ 0.87
Trub1Q8C0D0 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trub1Q8C0D0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.51■□□□□ 0.87
Trub1Q8C0D0 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trub1Q8C0D0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trub1Q8C0D0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trub1Q8C0D0 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms