Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Trerf1Q8BXJ2 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Trerf1Q8BXJ2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trerf1Q8BXJ2 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
Trerf1Q8BXJ2 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.76■□□□□ 0.91
Trerf1Q8BXJ2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trerf1Q8BXJ2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trerf1Q8BXJ2 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.76■□□□□ 0.91
Trerf1Q8BXJ2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trerf1Q8BXJ2 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trerf1Q8BXJ2 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.76■□□□□ 0.91
Trerf1Q8BXJ2 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trerf1Q8BXJ2 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trerf1Q8BXJ2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trerf1Q8BXJ2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trerf1Q8BXJ2 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.75■□□□□ 0.91
Trerf1Q8BXJ2 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trerf1Q8BXJ2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trerf1Q8BXJ2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Trerf1Q8BXJ2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Trerf1Q8BXJ2 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trerf1Q8BXJ2 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trerf1Q8BXJ2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trerf1Q8BXJ2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.74■□□□□ 0.91
Trerf1Q8BXJ2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trerf1Q8BXJ2 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trerf1Q8BXJ2 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trerf1Q8BXJ2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.74■□□□□ 0.91
Trerf1Q8BXJ2 Gm21956-201ENSMUST00000179946 522 ntBASIC20.74■□□□□ 0.91
Trerf1Q8BXJ2 Golgb1-201ENSMUST00000023534 498 ntBASIC20.74■□□□□ 0.91
Trerf1Q8BXJ2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trerf1Q8BXJ2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Trerf1Q8BXJ2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trerf1Q8BXJ2 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC20.74■□□□□ 0.91
Trerf1Q8BXJ2 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
Trerf1Q8BXJ2 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trerf1Q8BXJ2 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Trerf1Q8BXJ2 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Trerf1Q8BXJ2 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trerf1Q8BXJ2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Trerf1Q8BXJ2 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trerf1Q8BXJ2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trerf1Q8BXJ2 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trerf1Q8BXJ2 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Trerf1Q8BXJ2 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trerf1Q8BXJ2 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trerf1Q8BXJ2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Trerf1Q8BXJ2 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.73■□□□□ 0.91
Trerf1Q8BXJ2 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.73■□□□□ 0.91
Trerf1Q8BXJ2 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trerf1Q8BXJ2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trerf1Q8BXJ2 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trerf1Q8BXJ2 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trerf1Q8BXJ2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trerf1Q8BXJ2 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trerf1Q8BXJ2 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.72■□□□□ 0.91
Trerf1Q8BXJ2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trerf1Q8BXJ2 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trerf1Q8BXJ2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.72■□□□□ 0.91
Trerf1Q8BXJ2 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
Trerf1Q8BXJ2 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trerf1Q8BXJ2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.71■□□□□ 0.91
Trerf1Q8BXJ2 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.71■□□□□ 0.91
Trerf1Q8BXJ2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trerf1Q8BXJ2 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Trerf1Q8BXJ2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trerf1Q8BXJ2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trerf1Q8BXJ2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Trerf1Q8BXJ2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.91
Trerf1Q8BXJ2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Trerf1Q8BXJ2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Trerf1Q8BXJ2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trerf1Q8BXJ2 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Trerf1Q8BXJ2 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trerf1Q8BXJ2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trerf1Q8BXJ2 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trerf1Q8BXJ2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trerf1Q8BXJ2 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trerf1Q8BXJ2 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.69■□□□□ 0.9
Trerf1Q8BXJ2 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.69■□□□□ 0.9
Trerf1Q8BXJ2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trerf1Q8BXJ2 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Trerf1Q8BXJ2 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trerf1Q8BXJ2 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trerf1Q8BXJ2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Trerf1Q8BXJ2 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.68■□□□□ 0.9
Trerf1Q8BXJ2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trerf1Q8BXJ2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.68■□□□□ 0.9
Trerf1Q8BXJ2 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.68■□□□□ 0.9
Trerf1Q8BXJ2 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trerf1Q8BXJ2 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trerf1Q8BXJ2 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.68■□□□□ 0.9
Trerf1Q8BXJ2 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Trerf1Q8BXJ2 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trerf1Q8BXJ2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trerf1Q8BXJ2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trerf1Q8BXJ2 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trerf1Q8BXJ2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trerf1Q8BXJ2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trerf1Q8BXJ2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms