Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sfr1Q8BP27 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sfr1Q8BP27 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sfr1Q8BP27 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sfr1Q8BP27 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.16■□□□□ 0.82
Sfr1Q8BP27 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Sfr1Q8BP27 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sfr1Q8BP27 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.16■□□□□ 0.82
Sfr1Q8BP27 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sfr1Q8BP27 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.16■□□□□ 0.82
Sfr1Q8BP27 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
Sfr1Q8BP27 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Sfr1Q8BP27 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sfr1Q8BP27 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sfr1Q8BP27 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
Sfr1Q8BP27 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sfr1Q8BP27 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
Sfr1Q8BP27 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sfr1Q8BP27 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.15■□□□□ 0.82
Sfr1Q8BP27 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.15■□□□□ 0.82
Sfr1Q8BP27 Gm27454-201ENSMUST00000185090 204 ntBASIC20.15■□□□□ 0.82
Sfr1Q8BP27 Gm43137-201ENSMUST00000198052 594 ntBASIC20.15■□□□□ 0.82
Sfr1Q8BP27 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.15■□□□□ 0.82
Sfr1Q8BP27 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sfr1Q8BP27 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sfr1Q8BP27 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sfr1Q8BP27 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sfr1Q8BP27 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Sfr1Q8BP27 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sfr1Q8BP27 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sfr1Q8BP27 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sfr1Q8BP27 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sfr1Q8BP27 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sfr1Q8BP27 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Sfr1Q8BP27 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.14■□□□□ 0.81
Sfr1Q8BP27 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sfr1Q8BP27 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sfr1Q8BP27 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Sfr1Q8BP27 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.14■□□□□ 0.81
Sfr1Q8BP27 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Sfr1Q8BP27 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sfr1Q8BP27 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.13■□□□□ 0.81
Sfr1Q8BP27 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sfr1Q8BP27 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sfr1Q8BP27 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Sfr1Q8BP27 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sfr1Q8BP27 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sfr1Q8BP27 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sfr1Q8BP27 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sfr1Q8BP27 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Sfr1Q8BP27 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sfr1Q8BP27 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Sfr1Q8BP27 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sfr1Q8BP27 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.12■□□□□ 0.81
Sfr1Q8BP27 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sfr1Q8BP27 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sfr1Q8BP27 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sfr1Q8BP27 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.12■□□□□ 0.81
Sfr1Q8BP27 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sfr1Q8BP27 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Sfr1Q8BP27 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sfr1Q8BP27 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sfr1Q8BP27 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.11■□□□□ 0.81
Sfr1Q8BP27 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sfr1Q8BP27 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.11■□□□□ 0.81
Sfr1Q8BP27 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sfr1Q8BP27 Iqck-206ENSMUST00000208658 2891 ntBASIC20.11■□□□□ 0.81
Sfr1Q8BP27 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sfr1Q8BP27 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sfr1Q8BP27 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sfr1Q8BP27 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Sfr1Q8BP27 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Sfr1Q8BP27 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.1■□□□□ 0.81
Sfr1Q8BP27 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.1■□□□□ 0.81
Sfr1Q8BP27 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Sfr1Q8BP27 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sfr1Q8BP27 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
Sfr1Q8BP27 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sfr1Q8BP27 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sfr1Q8BP27 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Sfr1Q8BP27 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Sfr1Q8BP27 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Sfr1Q8BP27 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Sfr1Q8BP27 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sfr1Q8BP27 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sfr1Q8BP27 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sfr1Q8BP27 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Sfr1Q8BP27 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.08■□□□□ 0.81
Sfr1Q8BP27 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sfr1Q8BP27 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Sfr1Q8BP27 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.08■□□□□ 0.81
Sfr1Q8BP27 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Sfr1Q8BP27 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sfr1Q8BP27 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sfr1Q8BP27 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sfr1Q8BP27 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sfr1Q8BP27 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sfr1Q8BP27 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Sfr1Q8BP27 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Sfr1Q8BP27 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.08■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms